Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq9 123 4e-22
>seq9
Length=1212739
Score = 123 bits (136), Expect = 4e-22
Identities = 213/301 (71%), Gaps = 15/301 (5%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| |||||||| ||||||||||| |||||||| || ||| | |||
Sbjct 164859 GATCTGGCAGATGTAC-AAAAAGGCAGAGGCCTCCTTCTGGACCGCAGAAGAGATTGACT 164917
Query 1455835 TCGGCGCCGACACGGTC--CAC---TGGG-TGTC--GCTGAGCGACGACGAGCGCCATTT 1455886
| | | | | | || ||| ||| | | ||| | ||||||||||| | ||
Sbjct 164918 T----GTCAA-AGGATCTTCACGATTGGAATAACAGGCTCAATGACGACGAGCGTTACTT 164972
Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946
|||| ||||| ||||| || || ||| || |||||| || || ||||||| | |
Sbjct 164973 CATCTCTCACGTTCTCGCATTCTT-CGCAGCATCCGATGGAATTGTCAACGAGAACTTAG 165031
Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006
| | || | || || || ||| | |||||||||| || || ||||| |||||
Sbjct 165032 TCTCGAGATTCAGTAATGAAGTTCAAATTGCAGAGGCACGATTCTTCTACGGTTTCCAAG 165091
Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066
|| || || ||||||||||| ||||| ||||| || || |||||||| ||| ||||||
Sbjct 165092 TCATGATGGAGAACATCCACTCCGAAACATACTCTCTTCTCATCGACACATACATCAAGG 165151
Query 1456067 A 1456067
|
Sbjct 165152 A 165152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177751110504926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |