Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq18 109 5e-19
>seq18
Length=877782
Score = 109 bits (120), Expect = 5e-19
Identities = 166/235 (71%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 35503 TTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561
|||||| |||||||| | | | |||||| || || || || ||||||||||||||||
Sbjct 575114 TTTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGT 575173
Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621
|||| | |||| |||| |||| |||||| || || || ||||| ||||| || |
Sbjct 575174 AATCCAAAAGAGTTCTGCCGTCCTCCAACTGCTTTCCAGCGAAGATCAATCGCTGTTGAT 575233
Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCG 35681
| | |||| || |||||| ||| ||||| ||| | | | | | || || |
Sbjct 575234 CAGGTGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTATCAATAGTATCCGAAG 575293
Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| | ||||| || || || ||||| || || ||||| || |||||
Sbjct 575294 ATTCTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| || | | ||| || | || || || ||||| || || ||
Sbjct 575897 CTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAA 575956
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||| || || | ||||| | ||||||||| |||||| || | | |
Sbjct 575957 AATCAAACGCTGTTGATCGGGAGGAATCCCCTCCTTGTCTTGGATCTTGGCTTTGACATT 576016
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
| | |||||||| || || ||||| | ||||| || || || ||||
Sbjct 576017 GTCAATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCAGTCA 576066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450790089444840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |