Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq18 109 5e-19 >seq18 Length=877782 Score = 109 bits (120), Expect = 5e-19 Identities = 166/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 35503 TTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||||| |||||||| | | | |||||| || || || || |||||||||||||||| Sbjct 575114 TTTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGT 575173 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 |||| | |||| |||| |||| |||||| || || || ||||| ||||| || | Sbjct 575174 AATCCAAAAGAGTTCTGCCGTCCTCCAACTGCTTTCCAGCGAAGATCAATCGCTGTTGAT 575233 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCG 35681 | | |||| || |||||| ||| ||||| ||| | | | | | || || | Sbjct 575234 CAGGTGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTATCAATAGTATCCGAAG 575293 Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| | ||||| || || || ||||| || || ||||| || ||||| Sbjct 575294 ATTCTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | ||| || | || || || ||||| || || || Sbjct 575897 CTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAA 575956 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||| || || | ||||| | ||||||||| |||||| || | | | Sbjct 575957 AATCAAACGCTGTTGATCGGGAGGAATCCCCTCCTTGTCTTGGATCTTGGCTTTGACATT 576016 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | |||||||| || || ||||| | ||||| || || || |||| Sbjct 576017 GTCAATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCAGTCA 576066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790089444840