Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 313 3e-80 seq9 129 8e-25 >seq3 Length=2126074 Score = 313 bits (346), Expect = 3e-80 Identities = 1331/2073 (64%), Gaps = 65/2073 (3%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || || ||||| |||| || || | | ||||||| ||||||||| ||||| |||| | Sbjct 690537 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 690596 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || | ||||||| || |||||| ||| | ||| | ||||| || Sbjct 690597 CCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 690656 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||| ||||| |||||| ||||||||| || || || | ||| || ||||||| | | Sbjct 690657 TGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGCAGCCATTTGAACA 690716 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || | ||||| ||||||||||| |||||| ||| ||||| ||| |||||| | Sbjct 690717 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 690776 Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | | |||||||| ||||||||||| | || || ||||| || | ||| | Sbjct 690777 TTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCAGAC 690836 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730 || | | || | || | ||||| || ||||| | ||| ||||| || Sbjct 690837 CAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAACTTGGAATTCTCCG 690896 Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790 | | || | ||| | ||| || || || |||||||| | | |||| || || Sbjct 690897 GCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACCG 690956 Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850 || ||||| | ||| ||||| ||||||||||| || | | | || | || || Sbjct 690957 AGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCCG 691016 Query 68851 TGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTC 68910 ||| |||| | || | | | ||||||||| | |||||| || || | Sbjct 691017 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGGAGTGACGCCC 691076 Query 68911 CAAAGATCGTATTGTAGAATTCCGTT----ACTTGCATATGATCCATTATATGTTTCATA 68966 || | || ||||| || || || ||| | || || | || ||||| || Sbjct 691077 CACATGTCATATTGGAGTTCACCCTTGGAGACTGGA----GAGCCTTGGTAAGTTTCGTA 691132 Query 68967 AGGTCC---TTCCTGTTC-AGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTG 69022 || || ||||| | | | || | ||| | || || ||| ||| || || | Sbjct 691133 CGGGCCAAGTTCCTTTGCGATCTCG---ACAGATGAGGTC-AAGGCAGCGTGGTAGATGG 691188 Query 69023 TTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAA 69081 | || ||||||| | ||||| | |||| |||||| | ||||||||| | | || Sbjct 691189 TCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCTGGCGAGTCGAATGGAAGACG-AAG 691246 Query 69082 AG--AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 || || ||| ||||| || | || ||||| |||| | ||||||||| ||| | || Sbjct 691247 AGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAAT 691305 Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199 | ||| |||||| | | |||||||| || ||||| || || || || | |||| Sbjct 691306 TGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTC 691365 Query 69200 GGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCT 69252 || || |||| || || || | || || | |||||| | || | ||| | Sbjct 691366 TAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGT 691425 Query 69253 ATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTT 69312 | ||| | | || || | || || | ||||| || ||||||| | | Sbjct 691426 TGACGAAAGTTGGT-AGAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGG---T 691481 Query 69313 GCA---TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGC 69369 ||| || | | |||||||| || | || | ||||| || || || | Sbjct 691482 GCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTT 691541 Query 69370 TGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATC 69429 || || ||||| ||||| || || || |||||||| || || ||| | || ||||| | Sbjct 691542 TGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTT 691601 Query 69430 TGAGATTCGATAATAGATTTCCAAACGACCCT---AGCATTTATTACGGTCTTGTAACGC 69486 |||| || | |||||| | ||| || | | ||| || || |||||| || | Sbjct 691602 TGAGCCTCAAGAATAGAGTACCA---GAGCTTTTGAGCCTTGATA---GTCTTGCGACCC 691655 Query 69487 TTCTCT---TTTTCATAT-TGT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541 || || |||||||| | | ||| | ||| || || || || || ||||||| Sbjct 691656 TTTCCTGCCTTTTCATAACTCTCGTAGAGGGCC--TCAAACTCCTCGCCATAAACATCTG 691713 Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601 |||| ||||| |||||||| || ||||| | | ||| | ||| | | || || | Sbjct 691714 CCAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCT 691773 Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCA 69660 |||| || | ||| |||||||| | || ||| |||||||| | | | | |||||| Sbjct 691774 TCATGAACAAATCAGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCGCGAACTTCTTCC 691832 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || || || || ||||| |||||||| | || ||| | ||||||||| || || Sbjct 691833 TTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGG 691892 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || | || | | ||||| ||||| || || |||||||| | ||||| |||||||| Sbjct 691893 TAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTG 691952 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || | |||| ||||| |||| ||||||||| || || ||||| || || | || || Sbjct 691953 TTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTAT 692012 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || | || || || | ||| ||||| || || || || | || ||||| Sbjct 692013 GCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATC 692072 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960 | |||||| ||||| || || || ||||| || || ||||| ||| |||||| | Sbjct 692073 ATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATG 692132 Query 69961 AGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCG 70020 || || || || | ||| ||| ||| |||||| ||| | || || || || Sbjct 692133 AGGAAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCA 692192 Query 70021 TGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCA 70079 || || || | || | || | || ||||||||||| ||||| ||| ||||| || Sbjct 692193 TGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCA 692252 Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139 | | ||||| || | || |||||||| | ||| || ||||| || || | |||| Sbjct 692253 CCG-TGAATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACC 692311 Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAA 70197 || | || || |||||| || || || || ||||| || || | ||| |||| Sbjct 692312 ATCAAGACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAA 692371 Query 70198 AAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCC 70257 | || | || || | |||| |||| || |||| |||| || | | | || || | Sbjct 692372 A--TCCCGGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGAC-GCATTC 692428 Query 70258 ATAACAGTAGGTG-AGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAA 70316 || | || || || ||||| ||| |||||||| || || ||| | | | Sbjct 692429 GAAAGTTTCCTTGCTAATCATAGGAGAAGCTTTGCCATTTTTTGGGTTTGTATATTGGTA 692488 Query 70317 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGC 70376 |||||| || || | || | || || |||| ||||| | ||||||| || Sbjct 692489 TAAATCGCGGATAACGTGGGAGAACTGCTTCTTGGTTTGTTTGTGGAGGTTTGATACTGC 692548 Query 70377 TATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 || | || |||||||| ||||| || ||||| Sbjct 692549 AATACGAGCAGCTAGAATGGCATAATCGGGATG 692581 >seq9 Length=1212739 Score = 129 bits (142), Expect = 8e-25 Identities = 300/447 (67%), Gaps = 14/447 (3%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || ||||| | |||||||| || || || ||||| |||| || || || Sbjct 165760 TTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 165701 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442 |||||||| || || || || | | || || ||| | ||| || || | Sbjct 165700 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTA---CCCAAAGCAACC 165644 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT- 39501 | || | ||| || || || || |||||| ||||| | | | ||||| |||| Sbjct 165643 AGCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAA 165584 Query 39502 -GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTA 39560 ||| || || |||||||| || | || |||| |||||| || ||||| || || | Sbjct 165583 AGAGAGCAA--GGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAA 165526 Query 39561 TTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCA 39618 | | || || || | | | || | ||| | ||| || | | ||| Sbjct 165525 TGAC--ATCTTGGACGGCTTGTTTGGATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCA 165468 Query 39619 GGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCC 39678 ||||| || || || || ||||| | || | |||||| || || |||||||| Sbjct 165467 TGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 165408 Query 39679 AGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGAT 39738 || ||| |||||||||||||||||||| || || | |||||||||||||| |||||||| Sbjct 165407 AGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGAT 165348 Query 39739 GCCTTCTACTGCTGCAAATGCAACAAG 39765 ||||| || || || |||||||| || Sbjct 165347 ACCTTCAACAGCGGCGAATGCAACGAG 165321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903450697720