Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3 313 3e-80
seq9 129 8e-25
>seq3
Length=2126074
Score = 313 bits (346), Expect = 3e-80
Identities = 1331/2073 (64%), Gaps = 65/2073 (3%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| || ||||| |||| || || | | ||||||| ||||||||| ||||| |||| |
Sbjct 690537 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 690596
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | ||||||| || |||||| ||| | ||| | ||||| ||
Sbjct 690597 CCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 690656
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
||||| ||||| |||||| ||||||||| || || || | ||| || ||||||| | |
Sbjct 690657 TGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGCAGCCATTTGAACA 690716
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613
|| | ||||| ||||||||||| |||||| ||| ||||| ||| |||||| |
Sbjct 690717 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 690776
Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670
| | | |||||||| ||||||||||| | || || ||||| || | ||| |
Sbjct 690777 TTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCAGAC 690836
Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730
|| | | || | || | ||||| || ||||| | ||| ||||| ||
Sbjct 690837 CAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAACTTGGAATTCTCCG 690896
Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790
| | || | ||| | ||| || || || |||||||| | | |||| || ||
Sbjct 690897 GCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACCG 690956
Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850
|| ||||| | ||| ||||| ||||||||||| || | | | || | || ||
Sbjct 690957 AGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCCG 691016
Query 68851 TGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTC 68910
||| |||| | || | | | ||||||||| | |||||| || || |
Sbjct 691017 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGGAGTGACGCCC 691076
Query 68911 CAAAGATCGTATTGTAGAATTCCGTT----ACTTGCATATGATCCATTATATGTTTCATA 68966
|| | || ||||| || || || ||| | || || | || ||||| ||
Sbjct 691077 CACATGTCATATTGGAGTTCACCCTTGGAGACTGGA----GAGCCTTGGTAAGTTTCGTA 691132
Query 68967 AGGTCC---TTCCTGTTC-AGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTG 69022
|| || ||||| | | | || | ||| | || || ||| ||| || || |
Sbjct 691133 CGGGCCAAGTTCCTTTGCGATCTCG---ACAGATGAGGTC-AAGGCAGCGTGGTAGATGG 691188
Query 69023 TTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAA 69081
| || ||||||| | ||||| | |||| |||||| | ||||||||| | | ||
Sbjct 691189 TCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCTGGCGAGTCGAATGGAAGACG-AAG 691246
Query 69082 AG--AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139
|| || ||| ||||| || | || ||||| |||| | ||||||||| ||| | ||
Sbjct 691247 AGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAAT 691305
Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199
| ||| |||||| | | |||||||| || ||||| || || || || | ||||
Sbjct 691306 TGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTC 691365
Query 69200 GGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCT 69252
|| || |||| || || || | || || | |||||| | || | ||| |
Sbjct 691366 TAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGT 691425
Query 69253 ATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTT 69312
| ||| | | || || | || || | ||||| || ||||||| | |
Sbjct 691426 TGACGAAAGTTGGT-AGAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGG---T 691481
Query 69313 GCA---TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGC 69369
||| || | | |||||||| || | || | ||||| || || || |
Sbjct 691482 GCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTT 691541
Query 69370 TGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATC 69429
|| || ||||| ||||| || || || |||||||| || || ||| | || ||||| |
Sbjct 691542 TGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTT 691601
Query 69430 TGAGATTCGATAATAGATTTCCAAACGACCCT---AGCATTTATTACGGTCTTGTAACGC 69486
|||| || | |||||| | ||| || | | ||| || || |||||| || |
Sbjct 691602 TGAGCCTCAAGAATAGAGTACCA---GAGCTTTTGAGCCTTGATA---GTCTTGCGACCC 691655
Query 69487 TTCTCT---TTTTCATAT-TGT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541
|| || |||||||| | | ||| | ||| || || || || || |||||||
Sbjct 691656 TTTCCTGCCTTTTCATAACTCTCGTAGAGGGCC--TCAAACTCCTCGCCATAAACATCTG 691713
Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601
|||| ||||| |||||||| || ||||| | | ||| | ||| | | || || |
Sbjct 691714 CCAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCT 691773
Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCA 69660
|||| || | ||| |||||||| | || ||| |||||||| | | | | ||||||
Sbjct 691774 TCATGAACAAATCAGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCGCGAACTTCTTCC 691832
Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720
|| || || || ||||| |||||||| | || ||| | ||||||||| || ||
Sbjct 691833 TTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGG 691892
Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|| | || | | ||||| ||||| || || |||||||| | ||||| ||||||||
Sbjct 691893 TAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTG 691952
Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
|| | |||| ||||| |||| ||||||||| || || ||||| || || | || ||
Sbjct 691953 TTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTAT 692012
Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900
|| | || || || | ||| ||||| || || || || | || |||||
Sbjct 692013 GCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATC 692072
Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960
| |||||| ||||| || || || ||||| || || ||||| ||| |||||| |
Sbjct 692073 ATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATG 692132
Query 69961 AGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCG 70020
|| || || || | ||| ||| ||| |||||| ||| | || || || ||
Sbjct 692133 AGGAAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCA 692192
Query 70021 TGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCA 70079
|| || || | || | || | || ||||||||||| ||||| ||| ||||| ||
Sbjct 692193 TGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCA 692252
Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139
| | ||||| || | || |||||||| | ||| || ||||| || || | ||||
Sbjct 692253 CCG-TGAATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACC 692311
Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAA 70197
|| | || || |||||| || || || || ||||| || || | ||| ||||
Sbjct 692312 ATCAAGACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAA 692371
Query 70198 AAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCC 70257
| || | || || | |||| |||| || |||| |||| || | | | || || |
Sbjct 692372 A--TCCCGGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGAC-GCATTC 692428
Query 70258 ATAACAGTAGGTG-AGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAA 70316
|| | || || || ||||| ||| |||||||| || || ||| | | |
Sbjct 692429 GAAAGTTTCCTTGCTAATCATAGGAGAAGCTTTGCCATTTTTTGGGTTTGTATATTGGTA 692488
Query 70317 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGC 70376
|||||| || || | || | || || |||| ||||| | ||||||| ||
Sbjct 692489 TAAATCGCGGATAACGTGGGAGAACTGCTTCTTGGTTTGTTTGTGGAGGTTTGATACTGC 692548
Query 70377 TATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
|| | || |||||||| ||||| || |||||
Sbjct 692549 AATACGAGCAGCTAGAATGGCATAATCGGGATG 692581
>seq9
Length=1212739
Score = 129 bits (142), Expect = 8e-25
Identities = 300/447 (67%), Gaps = 14/447 (3%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| || ||||| | |||||||| || || || ||||| |||| || || ||
Sbjct 165760 TTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 165701
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442
|||||||| || || || || | | || || ||| | ||| || || |
Sbjct 165700 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTA---CCCAAAGCAACC 165644
Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT- 39501
| || | ||| || || || || |||||| ||||| | | | ||||| ||||
Sbjct 165643 AGCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAA 165584
Query 39502 -GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTA 39560
||| || || |||||||| || | || |||| |||||| || ||||| || || |
Sbjct 165583 AGAGAGCAA--GGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAA 165526
Query 39561 TTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCA 39618
| | || || || | | | || | ||| | ||| || | | |||
Sbjct 165525 TGAC--ATCTTGGACGGCTTGTTTGGATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCA 165468
Query 39619 GGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCC 39678
||||| || || || || ||||| | || | |||||| || || ||||||||
Sbjct 165467 TGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 165408
Query 39679 AGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGAT 39738
|| ||| |||||||||||||||||||| || || | |||||||||||||| ||||||||
Sbjct 165407 AGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGAT 165348
Query 39739 GCCTTCTACTGCTGCAAATGCAACAAG 39765
||||| || || || |||||||| ||
Sbjct 165347 ACCTTCAACAGCGGCGAATGCAACGAG 165321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686903450697720
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