Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4 114 1e-20 >seq4 Length=2084487 Score = 114 bits (126), Expect = 1e-20 Identities = 239/352 (68%), Gaps = 13/352 (4%) Strand=Plus/Plus Query 19439 TAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTT 19498 |||| ||||| ||| | | |||||||| || |||||||| |||||||| | ||| Sbjct 698344 TAAACGGTCCCGAAGTACTTAATAAATACGTTGGTCAATCCGAAGAAAACATCCGAAAGC 698403 Query 19499 TGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATT 19557 | || || || || ||| ||| | | || | |||| | | | ||| | | || || Sbjct 698404 TCTTCGCCGATGCCGAA-AAGGAGTACAAGGAAAAGGGAGACGAGAGTGGTCTTCATATC 698462 Query 19558 ATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG---------TGTA 19608 || || | ||||||||||| || | || || ||||||||| ||| || | Sbjct 698463 ATCATTTTCGATGAATTGGATGCTGTATGCAAACAAAGAGGTAGTGGAGCGGGTGGTGGA 698522 Query 19609 AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAA 19668 | ||| || |||| ||| ||||||||||| |||| ||| | || |||||| |||| Sbjct 698523 ACTGGTGTTGGAGACAGTGTCGTCAATCAACTGTTGTCTAAACTTGATGGTGTTGACCAG 698582 Query 19669 CTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC-CTT 19727 || || |||||| | ||||||| ||||| ||| | |||| | || || || ||| Sbjct 698583 CTCAACAATATTCTTCTTATTGGAATGACCAATCGTATGGATATGATTGATGATGCTCTT 698642 Query 19728 ATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAA 19779 ||| |||| || || ||||| | | || |||||| || || |||||| Sbjct 698643 CTTA-GACCAGGACGTCTGGAAGTTCACATGGAAATTTCTTTGCCAGATGAA 698693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452982191115