Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq4 114 1e-20
>seq4
Length=2084487
Score = 114 bits (126), Expect = 1e-20
Identities = 239/352 (68%), Gaps = 13/352 (4%)
Strand=Plus/Plus
Query 19439 TAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTT 19498
|||| ||||| ||| | | |||||||| || |||||||| |||||||| | |||
Sbjct 698344 TAAACGGTCCCGAAGTACTTAATAAATACGTTGGTCAATCCGAAGAAAACATCCGAAAGC 698403
Query 19499 TGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATT 19557
| || || || || ||| ||| | | || | |||| | | | ||| | | || ||
Sbjct 698404 TCTTCGCCGATGCCGAA-AAGGAGTACAAGGAAAAGGGAGACGAGAGTGGTCTTCATATC 698462
Query 19558 ATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG---------TGTA 19608
|| || | ||||||||||| || | || || ||||||||| ||| || |
Sbjct 698463 ATCATTTTCGATGAATTGGATGCTGTATGCAAACAAAGAGGTAGTGGAGCGGGTGGTGGA 698522
Query 19609 AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAA 19668
| ||| || |||| ||| ||||||||||| |||| ||| | || |||||| ||||
Sbjct 698523 ACTGGTGTTGGAGACAGTGTCGTCAATCAACTGTTGTCTAAACTTGATGGTGTTGACCAG 698582
Query 19669 CTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC-CTT 19727
|| || |||||| | ||||||| ||||| ||| | |||| | || || || |||
Sbjct 698583 CTCAACAATATTCTTCTTATTGGAATGACCAATCGTATGGATATGATTGATGATGCTCTT 698642
Query 19728 ATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAA 19779
||| |||| || || ||||| | | || |||||| || || ||||||
Sbjct 698643 CTTA-GACCAGGACGTCTGGAAGTTCACATGGAAATTTCTTTGCCAGATGAA 698693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397452982191115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |