Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 154 2e-32 seq9 131 2e-25 >seq3 Length=2126074 Score = 154 bits (170), Expect = 2e-32 Identities = 1034/1633 (63%), Gaps = 49/1633 (3%) Strand=Plus/Plus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| | ||| ||||| || | ||||| || | | |||| Sbjct 690576 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTG 690635 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | || ||| | |||| | |||||| ||| ||||||||||| || || Sbjct 690636 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCG 690695 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGA 118020 ||||| || ||||| | || || || ||| | || ||||||| |||||| |||| | Sbjct 690696 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 690753 Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080 || ||| || ||| |||| || | ||| ||||| || |||||||| | | | Sbjct 690754 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGA 690813 Query 118081 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 118138 | | | |||||| | | ||||| ||||| || | || || | | ||| ||| Sbjct 690814 TACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATG 690873 Query 118139 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGGTCGTGT 118197 | | ||||| || || || || || || | | || ||||| || | |||| Sbjct 690874 GGT--TAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-TAGATGTTTGAAGTGT 690930 Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTG 118257 |||| ||||| || || ||| ||| | |||||| | ||| || || ||||| |||| Sbjct 690931 ATGGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTG 690990 Query 118258 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT 118317 | | ||||| ||| || | || | || | | ||| || ||| | || |||||| | Sbjct 690991 CAACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAAT 691050 Query 118318 CGTAGT--TGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACG 118374 | | | || || | ||| ||||| ||| | ||||| ||| | ||| Sbjct 691051 CCCACAAATCAGAAGGAGTGACGCCC---CACATGTCATATTGGAGTTCACCCTTGGAGA 691107 Query 118375 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCGCC 118433 |||| || || | | || || || ||||| ||| || | ||| || | Sbjct 691108 CTGGAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGG 691167 Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 118493 || ||| | ||||| || || || |||||||| | || | |||||| || Sbjct 691168 TCAAGG-CAGCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGC 691226 Query 118494 GAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 118552 || || || | || || | || ||| |||| || |||||||| ||||| | | Sbjct 691227 GAGTCGAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGC 691285 Query 118553 AATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATC 118612 || || ||||| | | ||| | | | || | || |||||| | || |||| Sbjct 691286 GATAGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATC 691345 Query 118613 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 118672 || | | | || | ||| | ||| || | | || |||||||||| | |||| Sbjct 691346 AATGATCTTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATC 691405 Query 118673 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729 | || | | ||| ||||| |||| | | || || || ||||| |||| ||||| Sbjct 691406 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACA 691462 Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789 || |||||| ||| |||||| | || || ||||||||||| || || Sbjct 691463 GCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCG 691522 Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849 ||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| | Sbjct 691523 AATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAA 691582 Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCAC 118909 || | || || || ||||| | || ||||||| | ||||| | ||| | Sbjct 691583 AGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT 691642 Query 118910 AGTGGCGTTGGCTCGCCCCT---CTTCCT---CGTACTTTGTGTAGAGGGCTTCAAACTC 118963 ||| ||| || |||| || ||| | || | ||||||||| |||||||| Sbjct 691643 AGTC---TTG---CGACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTC 691696 Query 118964 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGAC 119022 || || | |||| | || || || || || ||||| | |||| ||||| | Sbjct 691697 CTCGCCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTC 691755 Query 119023 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 119082 || || || || ||||||||||| | || || ||||| | || |||||||||| | Sbjct 691756 CATTCTTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGC 691815 Query 119083 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 119142 | |||| ||||||| | || || || || | || | ||| || | | ||| | Sbjct 691816 GTGCGCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGG 691875 Query 119143 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTA 119199 | ||||| || || ||||| || || | | ||| || |||| |||| | | Sbjct 691876 CATGCCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAA 691935 Query 119200 CATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCAT 119259 |||| || |||||| ||| || || |||||||| |||| ||||||| ||| | |||| Sbjct 691936 CATATCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCAT 691995 Query 119260 TTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACC 119317 | || || ||| || | || | | || | || ||| |||| | ||||||||| Sbjct 691996 TAGTACCGGCGATGTATG-CAC-CAGTAGCACGGATTCTGTGAATGTTGAGACCAATACC 692053 Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377 || || ||||||||| || || | | | | | ||||||| ||||| || Sbjct 692054 ACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACT 692113 Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGT 119436 || | || | ||||||||||||| ||| | ||| || || || ||||| || Sbjct 692114 ATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGTTG-TGCTTGTGGAGTACCCGCAG 692172 Query 119437 TGAAGAGAGTTGG 119449 ||||| ||||| Sbjct 692173 AAAAGAGCGTTGG 692185 >seq9 Length=1212739 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||||||||| || ||||||||||||||||| || |||||| || || | ||||||||| Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 ||||| || | |||||| || | ||| || |||||||||||||| || || ||| Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACAGC 165336 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206 ||||| |||| |||||| | |||||||| | ||| |||| ||| || | || Sbjct 165335 GGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAATCCATTTGACAGC 165276 Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGAC 130236 ||| | |||||||||| || || || || Sbjct 165275 CCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430383935880