Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 2e-32
seq9 131 2e-25
>seq3
Length=2126074
Score = 154 bits (170), Expect = 2e-32
Identities = 1034/1633 (63%), Gaps = 49/1633 (3%)
Strand=Plus/Plus
Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902
|||||||| || ||||| | ||| ||||| || | ||||| || | | ||||
Sbjct 690576 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTG 690635
Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962
| || ||| | |||| | |||||| ||| ||||||||||| || ||
Sbjct 690636 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCG 690695
Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGA 118020
||||| || ||||| | || || || ||| | || ||||||| |||||| |||| |
Sbjct 690696 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 690753
Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080
|| ||| || ||| |||| || | ||| ||||| || |||||||| | | |
Sbjct 690754 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGA 690813
Query 118081 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 118138
| | | |||||| | | ||||| ||||| || | || || | | ||| |||
Sbjct 690814 TACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATG 690873
Query 118139 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGGTCGTGT 118197
| | ||||| || || || || || || | | || ||||| || | ||||
Sbjct 690874 GGT--TAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-TAGATGTTTGAAGTGT 690930
Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTG 118257
|||| ||||| || || ||| ||| | |||||| | ||| || || ||||| ||||
Sbjct 690931 ATGGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTG 690990
Query 118258 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT 118317
| | ||||| ||| || | || | || | | ||| || ||| | || |||||| |
Sbjct 690991 CAACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAAT 691050
Query 118318 CGTAGT--TGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACG 118374
| | | || || | ||| ||||| ||| | ||||| ||| | |||
Sbjct 691051 CCCACAAATCAGAAGGAGTGACGCCC---CACATGTCATATTGGAGTTCACCCTTGGAGA 691107
Query 118375 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCGCC 118433
|||| || || | | || || || ||||| ||| || | ||| || |
Sbjct 691108 CTGGAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGG 691167
Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 118493
|| ||| | ||||| || || || |||||||| | || | |||||| ||
Sbjct 691168 TCAAGG-CAGCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGC 691226
Query 118494 GAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 118552
|| || || | || || | || ||| |||| || |||||||| ||||| | |
Sbjct 691227 GAGTCGAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGC 691285
Query 118553 AATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATC 118612
|| || ||||| | | ||| | | | || | || |||||| | || ||||
Sbjct 691286 GATAGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATC 691345
Query 118613 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 118672
|| | | | || | ||| | ||| || | | || |||||||||| | ||||
Sbjct 691346 AATGATCTTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATC 691405
Query 118673 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729
| || | | ||| ||||| |||| | | || || || ||||| |||| |||||
Sbjct 691406 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACA 691462
Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789
|| |||||| ||| |||||| | || || ||||||||||| || ||
Sbjct 691463 GCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCG 691522
Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849
||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| |
Sbjct 691523 AATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAA 691582
Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCAC 118909
|| | || || || ||||| | || ||||||| | ||||| | ||| |
Sbjct 691583 AGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT 691642
Query 118910 AGTGGCGTTGGCTCGCCCCT---CTTCCT---CGTACTTTGTGTAGAGGGCTTCAAACTC 118963
||| ||| || |||| || ||| | || | ||||||||| ||||||||
Sbjct 691643 AGTC---TTG---CGACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTC 691696
Query 118964 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGAC 119022
|| || | |||| | || || || || || ||||| | |||| ||||| |
Sbjct 691697 CTCGCCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTC 691755
Query 119023 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 119082
|| || || || ||||||||||| | || || ||||| | || |||||||||| |
Sbjct 691756 CATTCTTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGC 691815
Query 119083 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 119142
| |||| ||||||| | || || || || | || | ||| || | | ||| |
Sbjct 691816 GTGCGCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGG 691875
Query 119143 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTA 119199
| ||||| || || ||||| || || | | ||| || |||| |||| | |
Sbjct 691876 CATGCCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAA 691935
Query 119200 CATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCAT 119259
|||| || |||||| ||| || || |||||||| |||| ||||||| ||| | ||||
Sbjct 691936 CATATCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCAT 691995
Query 119260 TTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACC 119317
| || || ||| || | || | | || | || ||| |||| | |||||||||
Sbjct 691996 TAGTACCGGCGATGTATG-CAC-CAGTAGCACGGATTCTGTGAATGTTGAGACCAATACC 692053
Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377
|| || ||||||||| || || | | | | | ||||||| ||||| ||
Sbjct 692054 ACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACT 692113
Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGT 119436
|| | || | ||||||||||||| ||| | ||| || || || ||||| ||
Sbjct 692114 ATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGTTG-TGCTTGTGGAGTACCCGCAG 692172
Query 119437 TGAAGAGAGTTGG 119449
||||| |||||
Sbjct 692173 AAAAGAGCGTTGG 692185
>seq9
Length=1212739
Score = 131 bits (144), Expect = 2e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||||||||| || ||||||||||||||||| || |||||| || || | |||||||||
Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
||||| || | |||||| || | ||| || |||||||||||||| || || |||
Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACAGC 165336
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206
||||| |||| |||||| | |||||||| | ||| |||| ||| || | ||
Sbjct 165335 GGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAATCCATTTGACAGC 165276
Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGAC 130236
||| | |||||||||| || || || ||
Sbjct 165275 CCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618430383935880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |