Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 196 6e-45 seq9 141 1e-28 >seq3 Length=2126074 Score = 196 bits (216), Expect = 6e-45 Identities = 1148/1809 (63%), Gaps = 73/1809 (4%) Strand=Plus/Minus Query 104166 TCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTCTTGATGGAAACCCCA 104224 |||| ||||||||| || | |||||| ||| || |||||| | ||| || Sbjct 692349 TCAAGACCCTTGAGC-GATCATATCTTTTACGTCTTGATGGTAAAGTTGCGGAGCGTCCT 692291 Query 104225 CAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTG 104284 || | ||| ||||||| || ||| | |||||||| || || || || || || | Sbjct 692290 CAACAAATGATCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATCGAAAGTGCTATC 692231 Query 104285 GAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAA 104343 || |||||| || |||||| | | ||| || | || || | ||||| ||||| Sbjct 692230 GAAACATACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAACGCTCTTTTC 692172 Query 104344 TGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTC 104403 ||| ||||| ||| | | ||| | || |||||||| |||| || || ||||| Sbjct 692171 TGCGGGTACTCCACAAGCACAACTTTCGTCGTGCTTCCTCATCGACATGAAAGAGGATAG 692112 Query 104404 AATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGG 104463 || | |||||||| | ||| | | | ||||| ||||||||| || || || Sbjct 692111 TATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGG 692052 Query 104464 TATTGGG------ATGCACA---TCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 |||||| || |||| ||| || | | || ||| ||| | || Sbjct 692051 TATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGC--ATACATCGCC-------GG 692001 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || ||||| | || |||||||| |||| |||||||| || || ||| ||| || | Sbjct 692000 TACTAATGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCAAG 691941 Query 104575 CTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| |||| | ||| || ||| || | || || || ||||||||||| Sbjct 691940 ATATGTTGATCAGGGTGGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGCCATG 691881 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 ||| || ||| | | ||||| ||||| | || ||||| ||| | || || | || Sbjct 691880 GCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAGTTCG 691821 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||||||||||||| || | |||||||| ||| | ||||||||| | || || | Sbjct 691820 CGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCGAAAA 691761 Query 104752 GAGTGGCAATTGGTCTCTCTTTTG-TCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 || ||| | ||| |||| | || ||| || || |||||| | | |||| | Sbjct 691760 GAATGGAGAATGGACTCTTATGTGCCCCAATGAATGC-CCTGGTTTGGCAGATGTTTATG 691702 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACG---AGGAAG---AAGGTCGGGCGACTG 104864 | ||||||||||| ||||| ||| | || | ||| || | ||||| |||| Sbjct 691701 GCGAGGAGTTTGAGGCCCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACTA 691642 Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 | | ||| | | ||| | ||||||| || |||||||||| || || | Sbjct 691641 TCAAG------GCTCAAAAGCTCTGGTACTCTATTCTTGAGGCTCAAACCGAAACCGGAA 691588 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 || | ||||||||||||||| || || ||| | ||||| || |||||||| | ||| Sbjct 691587 ATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTA 691528 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 || || ||||| | || ||||| ||| | || | | | ||||||| | Sbjct 691527 CTATTCGCAGCTCCAACTTGTGCACAGAGATCGTCGAGTACTCTGCACCAGATGAGGTTG 691468 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACA 105103 || |||||| | || ||||| ||||| |||| | | | | || | | || Sbjct 691467 CTTGCTGTAACTTGGCTTCAATTGCTCT-ACCAACTTTCGTCAACATGAATGAGGGAACT 691409 Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | ||||| |||| || ||||| ||| || ||| | |||| | |||| | Sbjct 691408 TATGATTTCCAAAAGCTTCACGAGGTTGTCCAAGTGGTCGTTAGAAACTTGAACAAGATC 691349 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 ||||||| || | ||| || || | || | | ||| | | || || || Sbjct 691348 ATTGATATCAACTATTATCCAGTACAAGAAGCCAGAAGGAGCAATTTCCGTCATCGACCT 691289 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 105280 || | | | |||||||| ||||| || |||| ||| | |||| ||| | |||| Sbjct 691288 ATCGCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTC 691232 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || || ||||| ||| | |||| | || ||||||||||| || ||||| || Sbjct 691231 GACTCGCCAGAAGCCAAGCACCTCAACATCCAGATTTTTGAGACCATCTACCACGCTGC- 691173 Query 105341 CTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 ||||| | | ||| | ||| ||| ||| || || ||||| | | || || Sbjct 691172 CTTGACCTCATCTGTCGAGATCGCAAAGGAACTTGGCCCGTACGAAACTTACCAAGGCTC 691113 Query 105400 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCA 105456 ||||| || |||||| | || |||| ||| ||||||| || | || || | Sbjct 691112 TCCAGTCTC-CAAGGGTGAACTCCAATATGACATGTGGG-GCGTCACTCC-TTCTGATTT 691056 Query 105457 CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 | || ||||| || | ||| || ||||||| | | || |||| ||| ||| || Sbjct 691055 GTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCTCTTCT 690996 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576 | || || ||||| || || ||| |||||||| | ||| || ||||| ||||| Sbjct 690995 TGTTGCACCTATGCCTACTGCTAGCACTTCACAAATCCTCGGTTTCAACGAATGTTTTGA 690936 Query 105577 ACCCTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 ||| ||||| | |||||||| || | | | || || ||||| || |||| | Sbjct 690935 ACCATACACTTCAAACATCTA-CTCACGTCGTGTTCTGGCCGGAGAATTCCAAGTTGTTA 690877 Query 105636 ACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 105693 || ||| ||| | | ||||| || || ||||| ||||| | | |||||| | Sbjct 690876 AC--CCATGGCTCCTCAAAGACCTTGTTGATATGGGTCTTTGGTCTGACAACATGAAGAA 690819 Query 105694 ---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAA 105749 | ||| || ||| ||||| || |||||||| || | |||||| ||| | Sbjct 690818 CCGTATCATTGCTGA----TGGTGGATCTATTCAAAACATCCCCAACATTCCAGCTGACA 690763 Query 105750 TTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGC 105807 | ||| | ||| || |||||||||| || | ||| | | || | ||||| Sbjct 690762 TCAAGGCCCTTTACAAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGTTCAAATGGC 690705 Query 105808 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCC 105867 || ||||| ||| || || |||||| |||| ||||| | |||| | ||| Sbjct 690704 TGCTGATCGCGGTGCATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCC 690645 Query 105868 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927 || ||| |||| || | ||||||||| | | ||||| |||| | || || || Sbjct 690644 TACAATGGGCAAGATCACATCTATGCACTTTGCTGGATGGAAATTGGGTTTGAAGACCGG 690585 Query 105928 GATGTATTA 105936 ||||| || Sbjct 690584 AATGTACTA 690576 >seq9 Length=1212739 Score = 141 bits (156), Expect = 1e-28 Identities = 346/519 (67%), Gaps = 18/519 (3%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 94793 |||||| || ||| | || || || ||||||||| | || ||| |||| ||| Sbjct 165245 AGTTCCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGAAGATAAGAGCTC 165304 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 | |||||||| | || ||| | ||||| || |||||| ||||||||||||||||| | Sbjct 165305 TACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGAT- 165363 Query 94854 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 ||| ||| | || | |||||||| ||||| ||||||||| | || ||| |||||||| Sbjct 165364 CTTTTGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCA 165423 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAAT 94972 |||| || ||||| ||||| || || |||||| || || || | || || Sbjct 165424 ACGAACTCATCTCCCGTGATGAAGGTCTCCACACCGATTTCGC------ATGCCTCCTAT 165477 Query 94973 TATTGCGTATTAA--ACCAACGACTGAGACTA----TTCATTCTATTGTTAAGGAAGCCG 95026 | | | | | || ||| | | | || | | || | | ||| ||||||| Sbjct 165478 TCTCTCATCTCAAGCACCGCCCATCCAAACAAGCCGTCCAAGATGTCATTACCGAAGCCG 165537 Query 95027 TTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATT 95086 |||| || || ||| |||| | || || ||||| ||| |||| | || ||||| | Sbjct 165538 TTGAAATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCTCTCTTTTAGGCATGAACT 165597 Query 95087 CTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGG 95146 || ||| |||| ||||||| || ||||| | || || | | | ||| Sbjct 165598 CTACTCTCATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTG--GTTGCTTTGGG 165655 Query 95147 TGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGA 95204 | | ||| | | || || || ||||| ||||||||||||||||| | | | Sbjct 165656 TAACGACAAAGTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATCTCCTTGGC 165715 Query 95205 CGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243 || ||||| ||||||||||| ||||| ||||| || || Sbjct 165716 TGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGAGATTA 165754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256257856520