Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 1e-34
seq9 136 4e-27
>seq3
Length=2126074
Score = 161 bits (178), Expect = 1e-34
Identities = 396/593 (67%), Gaps = 8/593 (1%)
Strand=Plus/Minus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCG--CGAGACATA 19173
||||||| || || || || || || || || || || | ||| | ||| |||||
Sbjct 692280 TCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATC--GAAAGTGCTATCGAAACATA 692223
Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233
| || ||||| | |||| ||| || || || | || || || || || |||||
Sbjct 692222 CAACTTGATGTCAAACAAGTACTTTACACATGCTTCCCCAACGCTCTTTTCTGCGGGTAC 692163
Query 19234 GA-ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292
|||| | || | ||| || ||||| | | ||||| || || || ||||| |
Sbjct 692162 TCCACAAGCA-CAACTTTCGTCGTGCTTCCTCATCGACATGAAAGAGGATAGTATTGATG 692104
Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA 19352
| |||||||| || | ||| || || ||||| ||| |||| ||||| ||
Sbjct 692103 GTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGGTC 692044
Query 19353 TCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411
|| || | | | | ||||| | | |||| || ||| || || || ||| ||
Sbjct 692043 TCAACATTCACAGA-ATCCGTGCTACTGGTGCATACATCGCCGGTACTAATGGAAATTCC 691985
Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471
| ||||| || || ||||| || || ||||||||||| || || || || | |||||
Sbjct 691984 AATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCAAGATATGTTGATCAGGGT 691925
Query 19472 GGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531
|| ||||||| ||| | || || | ||||| ||||||||||| || || || |
Sbjct 691924 GGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGCCATGGCATGCCGATGTTTTC 691865
Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591
|| || || || || ||| |||||| ||| | || || | ||| ||||| ||||||
Sbjct 691864 GAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAGTTCGCGCACGCGATCTCTTC 691805
Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651
|||||||||||||| || | |||||| || || || ||| | | |||||||
Sbjct 691804 TATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCGAAAAGAATGGAGAATGGACT 691745
Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704
|| |||||||| | ||||||||||| | | || || || ||||||| |||
Sbjct 691744 CTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTTATGGCGAGGAGTT 691692
Score = 154 bits (170), Expect = 2e-32
Identities = 886/1408 (63%), Gaps = 40/1408 (3%)
Strand=Plus/Plus
Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566
||| || |||||||| || || ||||||||| | ||||| || || ||| ||
Sbjct 690887 GAATTCTCCGGCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTC 690946
Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626
|||| || | ||| || | || || || ||||| ||||| || || ||||| ||
Sbjct 690947 GTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTT 691006
Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCAA------AATTCATTCGC 78680
|||| || || |||||| ||| | ||||||| || ||| |
Sbjct 691007 GCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGG 691066
Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740
| || ||||||||||| ||| || ||||| ||| | || || || | | | ||
Sbjct 691067 AGTGACGCCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGAGAGCCTTGGTAAGT 691126
Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800
||||| | || ||||| |||| ||| || | || ||| |||||||| |
Sbjct 691127 TTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGGTCAAGGCAGCGTGGTAGAT 691186
Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTG-GTCTCGTCGAACGAAAGGCCGA 78859
| ||| || || ||||||| | || | ||| | | |||||| | ||| | |
Sbjct 691187 GGTCTCAAAAATCTGGATGTTGAGGT-GCTTGGCTTCTGGCGAGTCGAATGGAAGACGAA 691245
Query 78860 GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGT 78919
| || ||| |||| || || || || || || | |||||| ||||| || || | |
Sbjct 691246 GAGCCAAGAAAGCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAAT 691305
Query 78920 TGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTAC 78979
||||| ||| ||| | | || ||| |||| ||| |||| ||||| ||| |
Sbjct 691306 TGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTC 691365
Query 78980 GCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAA------TGATTTCCTT 79033
||| || | ||||||| | || ||||||| || | ||| |
Sbjct 691366 TAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGT 691425
Query 79034 TGATGAAAGTCGGTAG-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092
||| |||||| ||||| ||| | || |||| ||| || || ||| || || |
Sbjct 691426 TGACGAAAGTTGGTAGAGCA-ATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCA 691484
Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGA----CGACTTGATGGTGCCGATGTTCTT 79148
|| ||||| ||| ||||||||||| || || ||| || || || | ||||||
Sbjct 691485 GAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGA----ATAGTACCAAGGTTCTT 691540
Query 79149 CTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAAC 79208
||||||||||||| ||| || || || ||||| |||| | || | ||||| ||
Sbjct 691541 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGT 691600
Query 79209 CTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACC 79268
||| || |||| || ||||| | | ||| || | ||||| |||||
Sbjct 691601 TTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGATAG---TCTTG---CGACC 691654
Query 79269 CTGTGCGACGT------ACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGG 79322
|| | | | | | || ||| | | | || |||| ||||| ||||| |
Sbjct 691655 CTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGC 691714
Query 79323 CAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTC 79382
|| || ||||| || | |||||||| || ||| || | | ||| || || ||
Sbjct 691715 CAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTT 691774
Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442
|||||| | || || ||||||| ||| |||||| ||||| || | || || |
Sbjct 691775 CATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTT 691834
Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502
|| |||||| || || || ||||| || | | ||||| ||||| ||||| || ||
Sbjct 691835 ACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTA 691894
Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562
| || || | |||| ||| ||| || ||||| | || || | || ||||||||
Sbjct 691895 AACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTT 691954
Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGT 79622
||||||||| |||||||| || || || | || || || || ||| ||| ||
Sbjct 691955 GAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGC 692014
Query 79623 ACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGT 79681
||| | || || || | | | | || || || || || |||| ||| |||||
Sbjct 692015 ACCAGTAGCACGGAT-TCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCA 692073
Query 79682 GCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCA 79741
|| || ||| | || |||||||| || || || || || ||||| ||| |
Sbjct 692074 TGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGA 692133
Query 79742 GGAAGCAGCTCGACATCTGTGGGTTGT-TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCG 79800
||||||| ||| | ||| | |||| ||||| || ||||| || || | ||
Sbjct 692134 GGAAGCACGACGAAAGTTGT-GCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCA 692192
Query 79801 TGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCG 79860
|| || ||| |||| | ||||| | ||| || || | | | || || ||
Sbjct 692193 TGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCA 692252
Query 79861 CCGTGGATGCCGACCGCGACGCGCATGA 79888
||||| || || || || || |||||||
Sbjct 692253 CCGTGAATACCCACGGCAACACGCATGA 692280
>seq9
Length=1212739
Score = 136 bits (150), Expect = 4e-27
Identities = 310/452 (69%), Gaps = 12/452 (3%)
Strand=Plus/Plus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
||||| ||||||||| | || || || || ||||| |||||||||||||| || ||
Sbjct 165309 TTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGATCTTTT 165368
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| || |||||||||||||||||||| |||||| | || || | |||||||||||
Sbjct 165369 GCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCAACGAA 165428
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152
|| || ||||| || || || ||||| || || ||| || | | |||||| | | |
Sbjct 165429 CTCATCTCCCGTGATGAAGGTCTCCACACCGATTTCGCA-TGCCTC-CTATTCTCTCAT- 165485
Query 60153 TTGGAAAAATGCCCTTCCAAGGATATTC--ACAAGAT-TGTTCAGTG-GGCTTGTGAAGT 60208
| | | |||| ||||| | | | |||||| | | | | || |||| |
Sbjct 165486 CTCAAGCACCGCCCATCCAAACA-AGCCGTCCAAGATGTCATTACCGAAGCCGTTGAAAT 165544
Query 60209 GGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA 60268
|| || ||| | || || || ||||| ||| || |||| ||| || ||
Sbjct 165545 CGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCTCTCTTTTAGGCATGAACTCTACTCT 165604
Query 60269 AATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAGAAGGACC 60328
|||| ||| |||||| |||| ||||| || || || ||| ||||| || |||
Sbjct 165605 CATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTGG-TTGCTTTGGGTAACGACA 165663
Query 60329 AA-TTTAC-GGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAG 60386
|| | ||| | || ||||| ||||||| ||||||| |||||| |||| || |||
Sbjct 165664 AAGTCTACAAGTCTG-CCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGCAAG 165722
Query 60387 ACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
||||||||||| |||||| | || || |||||
Sbjct 165723 ACCAACTTCTTCGAGAAGAGAGTTGGAGATTA 165754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548520528363120
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