Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 seq9 136 4e-27 >seq3 Length=2126074 Score = 161 bits (178), Expect = 1e-34 Identities = 396/593 (67%), Gaps = 8/593 (1%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCG--CGAGACATA 19173 ||||||| || || || || || || || || || || | ||| | ||| ||||| Sbjct 692280 TCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATC--GAAAGTGCTATCGAAACATA 692223 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | || ||||| | |||| ||| || || || | || || || || || ||||| Sbjct 692222 CAACTTGATGTCAAACAAGTACTTTACACATGCTTCCCCAACGCTCTTTTCTGCGGGTAC 692163 Query 19234 GA-ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292 |||| | || | ||| || ||||| | | ||||| || || || ||||| | Sbjct 692162 TCCACAAGCA-CAACTTTCGTCGTGCTTCCTCATCGACATGAAAGAGGATAGTATTGATG 692104 Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA 19352 | |||||||| || | ||| || || ||||| ||| |||| ||||| || Sbjct 692103 GTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGGTC 692044 Query 19353 TCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 || || | | | | ||||| | | |||| || ||| || || || ||| || Sbjct 692043 TCAACATTCACAGA-ATCCGTGCTACTGGTGCATACATCGCCGGTACTAATGGAAATTCC 691985 Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471 | ||||| || || ||||| || || ||||||||||| || || || || | ||||| Sbjct 691984 AATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCAAGATATGTTGATCAGGGT 691925 Query 19472 GGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 || ||||||| ||| | || || | ||||| ||||||||||| || || || | Sbjct 691924 GGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGCCATGGCATGCCGATGTTTTC 691865 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 || || || || || ||| |||||| ||| | || || | ||| ||||| |||||| Sbjct 691864 GAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAGTTCGCGCACGCGATCTCTTC 691805 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 |||||||||||||| || | |||||| || || || ||| | | ||||||| Sbjct 691804 TATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCGAAAAGAATGGAGAATGGACT 691745 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704 || |||||||| | ||||||||||| | | || || || ||||||| ||| Sbjct 691744 CTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTTATGGCGAGGAGTT 691692 Score = 154 bits (170), Expect = 2e-32 Identities = 886/1408 (63%), Gaps = 40/1408 (3%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||| || |||||||| || || ||||||||| | ||||| || || ||| || Sbjct 690887 GAATTCTCCGGCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTC 690946 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 |||| || | ||| || | || || || ||||| ||||| || || ||||| || Sbjct 690947 GTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTT 691006 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCAA------AATTCATTCGC 78680 |||| || || |||||| ||| | ||||||| || ||| | Sbjct 691007 GCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGG 691066 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | || ||||||||||| ||| || ||||| ||| | || || || | | | || Sbjct 691067 AGTGACGCCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGAGAGCCTTGGTAAGT 691126 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 ||||| | || ||||| |||| ||| || | || ||| |||||||| | Sbjct 691127 TTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGGTCAAGGCAGCGTGGTAGAT 691186 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTG-GTCTCGTCGAACGAAAGGCCGA 78859 | ||| || || ||||||| | || | ||| | | |||||| | ||| | | Sbjct 691187 GGTCTCAAAAATCTGGATGTTGAGGT-GCTTGGCTTCTGGCGAGTCGAATGGAAGACGAA 691245 Query 78860 GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGT 78919 | || ||| |||| || || || || || || | |||||| ||||| || || | | Sbjct 691246 GAGCCAAGAAAGCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAAT 691305 Query 78920 TGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTAC 78979 ||||| ||| ||| | | || ||| |||| ||| |||| ||||| ||| | Sbjct 691306 TGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTC 691365 Query 78980 GCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAA------TGATTTCCTT 79033 ||| || | ||||||| | || ||||||| || | ||| | Sbjct 691366 TAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGT 691425 Query 79034 TGATGAAAGTCGGTAG-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092 ||| |||||| ||||| ||| | || |||| ||| || || ||| || || | Sbjct 691426 TGACGAAAGTTGGTAGAGCA-ATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCA 691484 Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGA----CGACTTGATGGTGCCGATGTTCTT 79148 || ||||| ||| ||||||||||| || || ||| || || || | |||||| Sbjct 691485 GAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGA----ATAGTACCAAGGTTCTT 691540 Query 79149 CTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAAC 79208 ||||||||||||| ||| || || || ||||| |||| | || | ||||| || Sbjct 691541 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGT 691600 Query 79209 CTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACC 79268 ||| || |||| || ||||| | | ||| || | ||||| ||||| Sbjct 691601 TTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGATAG---TCTTG---CGACC 691654 Query 79269 CTGTGCGACGT------ACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGG 79322 || | | | | | || ||| | | | || |||| ||||| ||||| | Sbjct 691655 CTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGC 691714 Query 79323 CAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTC 79382 || || ||||| || | |||||||| || ||| || | | ||| || || || Sbjct 691715 CAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTT 691774 Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442 |||||| | || || ||||||| ||| |||||| ||||| || | || || | Sbjct 691775 CATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTT 691834 Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502 || |||||| || || || ||||| || | | ||||| ||||| ||||| || || Sbjct 691835 ACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTA 691894 Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562 | || || | |||| ||| ||| || ||||| | || || | || |||||||| Sbjct 691895 AACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTT 691954 Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGT 79622 ||||||||| |||||||| || || || | || || || || ||| ||| || Sbjct 691955 GAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGC 692014 Query 79623 ACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGT 79681 ||| | || || || | | | | || || || || || |||| ||| ||||| Sbjct 692015 ACCAGTAGCACGGAT-TCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCA 692073 Query 79682 GCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCA 79741 || || ||| | || |||||||| || || || || || ||||| ||| | Sbjct 692074 TGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGA 692133 Query 79742 GGAAGCAGCTCGACATCTGTGGGTTGT-TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCG 79800 ||||||| ||| | ||| | |||| ||||| || ||||| || || | || Sbjct 692134 GGAAGCACGACGAAAGTTGT-GCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCA 692192 Query 79801 TGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCG 79860 || || ||| |||| | ||||| | ||| || || | | | || || || Sbjct 692193 TGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCA 692252 Query 79861 CCGTGGATGCCGACCGCGACGCGCATGA 79888 ||||| || || || || || ||||||| Sbjct 692253 CCGTGAATACCCACGGCAACACGCATGA 692280 >seq9 Length=1212739 Score = 136 bits (150), Expect = 4e-27 Identities = 310/452 (69%), Gaps = 12/452 (3%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| ||||||||| | || || || || ||||| |||||||||||||| || || Sbjct 165309 TTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGATCTTTT 165368 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | || |||||||||||||||||||| |||||| | || || | ||||||||||| Sbjct 165369 GCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCAACGAA 165428 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152 || || ||||| || || || ||||| || || ||| || | | |||||| | | | Sbjct 165429 CTCATCTCCCGTGATGAAGGTCTCCACACCGATTTCGCA-TGCCTC-CTATTCTCTCAT- 165485 Query 60153 TTGGAAAAATGCCCTTCCAAGGATATTC--ACAAGAT-TGTTCAGTG-GGCTTGTGAAGT 60208 | | | |||| ||||| | | | |||||| | | | | || |||| | Sbjct 165486 CTCAAGCACCGCCCATCCAAACA-AGCCGTCCAAGATGTCATTACCGAAGCCGTTGAAAT 165544 Query 60209 GGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA 60268 || || ||| | || || || ||||| ||| || |||| ||| || || Sbjct 165545 CGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCTCTCTTTTAGGCATGAACTCTACTCT 165604 Query 60269 AATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAGAAGGACC 60328 |||| ||| |||||| |||| ||||| || || || ||| ||||| || ||| Sbjct 165605 CATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTGG-TTGCTTTGGGTAACGACA 165663 Query 60329 AA-TTTAC-GGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAG 60386 || | ||| | || ||||| ||||||| ||||||| |||||| |||| || ||| Sbjct 165664 AAGTCTACAAGTCTG-CCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGCAAG 165722 Query 60387 ACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||||||||| |||||| | || || ||||| Sbjct 165723 ACCAACTTCTTCGAGAAGAGAGTTGGAGATTA 165754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520528363120