Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 1e-13 >seq9 Length=1212739 Score = 91.5 bits (100), Expect = 1e-13 Identities = 561/901 (62%), Gaps = 74/901 (8%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || |||| ||| |||||||| || || ||||| | || || || || Sbjct 165760 TTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 165701 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC---ACACTTTAGAGCTACA 4373 ||||| || || || || || | | ||||| ||| || || | | ||| || Sbjct 165700 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCC---AAAGCAACC 165644 Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 |||| || ||||| || || || || || || ||||||| |||| || || | Sbjct 165643 AGCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAA 165584 Query 4434 A-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | || ||| || || | ||||| || |||||||| || |||||||| || || Sbjct 165583 AGAGAGCA-AGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAAT 165525 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAA---CA 4549 | ||||| | | ||| ||||| | | || || | | |||| || Sbjct 165524 GACATCTTGGACGGCTTGTTTGGATGGGCGGTGCT-TGAG-ATG-AGAGAATAGGAGGCA 165468 Query 4550 CGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCC 4609 || ||||| || | |||||| || | | || |||||||| || || || | ||| Sbjct 165467 TGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 165408 Query 4610 GGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATAT 4669 | ||| | ||| | |||||| ||||| || || | ||||| || ||||| ||||| || Sbjct 165407 AGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGAT 165348 Query 4670 GCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCT-TTGTCTTTA 4727 ||||| || ||||| || || || | || | || | || ||| || |||| | Sbjct 165347 ACCTTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGA--GCTCTTATCTTCA 165290 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGG---------AATTGT---- 4774 |||||||| | ||||| | || |||||||||| ||| || |||||| Sbjct 165289 ATCCATTTGACAGCCCAATCGGCCTTTTTCTTAATGCAAGGAACTTTCAAAATTGTTAGA 165230 Query 4775 ---------GTAT-------------------------------ATAGCGTTAAATAATT 4794 |||| |||||||| || | | Sbjct 165229 TGATTTGTTGTATGTTGGTGTAGGGTTATGGCTTACTGGTGTCAATAGCGTTGAAAAGGT 165170 Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854 | |||| | | || | || || ||||| || || || || |||| || | Sbjct 165169 ATGTCTTTTGTGCTTGCTCCTTGATGTATGTGTCGATGAGAAGAGAGTATGTTTCGGAGT 165110 Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914 | || || || || | || || ||||| ||| ||| || |||| | |||||||| Sbjct 165109 GGATGTTCTCCATCATGACTTGGAAACCGTAGAAGAATCGTGCCTCTGCAATTTGAACTT 165050 Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974 | |||| ||||| |||||||| ||||| || || || || ||||| || || | Sbjct 165049 CATTACTGAATCTCGAGACTAAGTTCTCGTTGACAATTCCATCGGATGCTGCGAAGAATG 164990 Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCA 5031 | | ||| ||||| || ||||| | ||||| || || || ||||| | | | | Sbjct 164989 CGAGAACGTGAGAGATGAAGTAACGCTCGTCGTCATTGAGCCTGTTATTCCAATCGTGAA 164930 Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091 ||| || | || |||| ||||| | ||||| || || || || || |||||||||| Sbjct 164929 GATCCTTTGACAAGTCAATCTCTTCTGCGGTCCAGAAGGAGGCCTCTGCCTTTTTGTACA 164870 Query 5092 T 5092 | Sbjct 164869 T 164869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046357492459