Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq9 91.5 1e-13
>seq9
Length=1212739
Score = 91.5 bits (100), Expect = 1e-13
Identities = 561/901 (62%), Gaps = 74/901 (8%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| || |||| ||| |||||||| || || ||||| | || || || ||
Sbjct 165760 TTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 165701
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC---ACACTTTAGAGCTACA 4373
||||| || || || || || | | ||||| ||| || || | | ||| ||
Sbjct 165700 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCC---AAAGCAACC 165644
Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433
|||| || ||||| || || || || || || ||||||| |||| || || |
Sbjct 165643 AGCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAA 165584
Query 4434 A-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492
| | || ||| || || | ||||| || |||||||| || |||||||| || ||
Sbjct 165583 AGAGAGCA-AGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAAT 165525
Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAA---CA 4549
| ||||| | | ||| ||||| | | || || | | |||| ||
Sbjct 165524 GACATCTTGGACGGCTTGTTTGGATGGGCGGTGCT-TGAG-ATG-AGAGAATAGGAGGCA 165468
Query 4550 CGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCC 4609
|| ||||| || | |||||| || | | || |||||||| || || || | |||
Sbjct 165467 TGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 165408
Query 4610 GGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATAT 4669
| ||| | ||| | |||||| ||||| || || | ||||| || ||||| ||||| ||
Sbjct 165407 AGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGAT 165348
Query 4670 GCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCT-TTGTCTTTA 4727
||||| || ||||| || || || | || | || | || ||| || |||| |
Sbjct 165347 ACCTTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGA--GCTCTTATCTTCA 165290
Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGG---------AATTGT---- 4774
|||||||| | ||||| | || |||||||||| ||| || ||||||
Sbjct 165289 ATCCATTTGACAGCCCAATCGGCCTTTTTCTTAATGCAAGGAACTTTCAAAATTGTTAGA 165230
Query 4775 ---------GTAT-------------------------------ATAGCGTTAAATAATT 4794
|||| |||||||| || | |
Sbjct 165229 TGATTTGTTGTATGTTGGTGTAGGGTTATGGCTTACTGGTGTCAATAGCGTTGAAAAGGT 165170
Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854
| |||| | | || | || || ||||| || || || || |||| || |
Sbjct 165169 ATGTCTTTTGTGCTTGCTCCTTGATGTATGTGTCGATGAGAAGAGAGTATGTTTCGGAGT 165110
Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914
| || || || || | || || ||||| ||| ||| || |||| | ||||||||
Sbjct 165109 GGATGTTCTCCATCATGACTTGGAAACCGTAGAAGAATCGTGCCTCTGCAATTTGAACTT 165050
Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974
| |||| ||||| |||||||| ||||| || || || || ||||| || || |
Sbjct 165049 CATTACTGAATCTCGAGACTAAGTTCTCGTTGACAATTCCATCGGATGCTGCGAAGAATG 164990
Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCA 5031
| | ||| ||||| || ||||| | ||||| || || || ||||| | | | |
Sbjct 164989 CGAGAACGTGAGAGATGAAGTAACGCTCGTCGTCATTGAGCCTGTTATTCCAATCGTGAA 164930
Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091
||| || | || |||| ||||| | ||||| || || || || || ||||||||||
Sbjct 164929 GATCCTTTGACAAGTCAATCTCTTCTGCGGTCCAGAAGGAGGCCTCTGCCTTTTTGTACA 164870
Query 5092 T 5092
|
Sbjct 164869 T 164869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427046357492459
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |