Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3 322 7e-83 seq9 100 4e-16 >seq3 Length=2126074 Score = 322 bits (356), Expect = 7e-83 Identities = 1161/1794 (65%), Gaps = 58/1794 (3%) Strand=Plus/Plus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||| | || || ||||| || | || || | | ||||||| ||||||||| Sbjct 690524 TTCTTGATCAACGGTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACAT 690583 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 || || || | ||||| ||||||| || ||||| ||| | ||| | Sbjct 690584 TCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGT 690643 Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 |||||| || ||||| ||||| || ||| ||||||||| || || || | |||||| Sbjct 690644 AGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGC 690703 Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 ||||||| | ||| || ||||| ||||||||||| ||| ||| ||| ||||| Sbjct 690704 AGCCATTTGAACAATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGAT 690763 Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 ||| |||||| ||| | | |||||||| || |||||||| | || || ||||| Sbjct 690764 GTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTT 690823 Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 || | ||| ||| | | | || | || | ||||| || ||||| | Sbjct 690824 CATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAAC 690883 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 ||| |||||||| | || || | ||| | ||| || || || |||||||| | | | Sbjct 690884 TTGGAATTCTCCGGCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACA 690943 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 ||| ||| || | ||||| | ||| |||||| ||||||||||| || | | | Sbjct 690944 TTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGA 691003 Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305 || | | || ||| |||| | || | | | | ||||||||| | ||| || Sbjct 691004 GTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGA 691063 Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTT----ACTAGCATATGATCCAT 77361 ||| || |||| | || ||||| || || || ||| | || || | Sbjct 691064 AGGAGTGACGCCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGA----GAGCCTT 691119 Query 77362 TATATGTTTCATAAGGTCC---TTCTGTTTC-AGCTAGTTCACAACTCGCTTCCAATGCT 77417 || ||||| || || || ||| || | | || | ||| | || || || Sbjct 691120 GGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCG---ACAGATGAGGTC-AAGGCA 691175 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAA 77476 ||| || || || || ||||||| | ||||| | |||| ||||| || || Sbjct 691176 GCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCTGGCGAGTCGAA 691234 Query 77477 CGGATAATGTAAAAG--AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGT 77534 ||| | | || || || |||| |||| || | || ||||| |||| | | |||||| Sbjct 691235 TGGAAGACG-AAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGATAGGT 691292 Query 77535 CTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATT 77594 | ||| | |||| || | |||||| | | |||||||| || || || || || Sbjct 691293 CGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATC 691352 Query 77595 TTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654 || || | |||||||| || |||| || || || | || || | |||||| | || Sbjct 691353 TTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTT 691412 Query 77655 CCATCTATAAC-------AAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTAC 77707 || || | | ||| || | | ||| || || || | ||||| || || Sbjct 691413 CCCTCATTCATGTTGACGAAAGTTGGT-AGAGCAATTGAAGCCAAGTTACAGCAAGCAAC 691471 Query 77708 CTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGT 77764 ||||| | || ||| || | | ||||| || || | || | ||||| Sbjct 691472 CTCATCTG-GT--GCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGT 691528 Query 77765 GCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGT 77824 || || || | |||||||||||| || ||||||| || || ||||| || || ||| | Sbjct 691529 ACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATT 691588 Query 77825 CCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGA 77884 |||||||| | || | || | |||||| | ||||| | ||| || || || Sbjct 691589 TCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT---AGT 691645 Query 77885 TTTGTATCGCCTCTCTC------TTTCATA--TTGAGTATATAGCCGTTCAAATTCATCT 77936 ||| || | || || ||||||| | ||| | ||| ||||| || || Sbjct 691646 CTTG---CGACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCC--TCAAACTCCTCG 691700 Query 77937 CCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCT 77996 || ||||||| |||| |||||||||||||| |||||||| | | ||| || |||| Sbjct 691701 CCATAAACATCTGCCAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTC 691760 Query 77997 TCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 78056 | | || || ||||| || | |||||| ||||| | ||| || ||||| || | Sbjct 691761 TTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCG 691820 Query 78057 CTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGC 78116 | | |||||| || || ||||| ||||| |||||||| | || ||| | |||| Sbjct 691821 CGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGC 691880 Query 78117 CATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATAT 78176 ||||| || || || | || | | | || || ||||| ||||| |||||||| | |||| Sbjct 691881 CATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATAT 691940 Query 78177 CTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTT 78236 || || ||||| || |||||| | ||| |||| |||||| || || ||||||| || Sbjct 691941 CTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTA 692000 Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCC 78296 || | || || ||| | || || || | |||| | || || || || || Sbjct 692001 CCGGCGATGTATGCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCA 692060 Query 78297 ATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 |||| || || | || ||| ||||| |||||||||||||| || ||||| || || Sbjct 692061 TTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCT 692120 Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416 |||||| | || || || || | ||| || ||| || ||| ||| | Sbjct 692121 TTCATGTCGATGAGGAAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGC 692180 Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476 || || || ||||| ||||| | || | || | | ||||||||||| ||||| | Sbjct 692181 GTTGGGGAAGCATGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTT 692240 Query 78477 TCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529 || || || || | ||||| || || || |||||||| | ||| || ||||| Sbjct 692241 TCGATATCATCACCG-TGAATACCCACGGCAACACGCATGATCATTTGTTGAGG 692293 >seq9 Length=1212739 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 ||||| ||||| || ||||||||||| | || | |||||| || || ||||| Sbjct 165469 CATGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGT 165410 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || | ||| || ||||| ||||||||||| || |||| || ||||||||||| ||||| Sbjct 165409 CCAGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAG 165350 Query 48261 ATGCCTTCTACGGCCGCAAATGC 48283 || ||||| || || || ||||| Sbjct 165349 ATACCTTCAACAGCGGCGAATGC 165327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663390266720