Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3 322 7e-83
seq9 100 4e-16
>seq3
Length=2126074
Score = 322 bits (356), Expect = 7e-83
Identities = 1161/1794 (65%), Gaps = 58/1794 (3%)
Strand=Plus/Plus
Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828
||||| ||| | || || ||||| || | || || | | ||||||| |||||||||
Sbjct 690524 TTCTTGATCAACGGTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACAT 690583
Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888
|| || || | ||||| ||||||| || ||||| ||| | ||| |
Sbjct 690584 TCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGT 690643
Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948
|||||| || ||||| ||||| || ||| ||||||||| || || || | ||||||
Sbjct 690644 AGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGC 690703
Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008
||||||| | ||| || ||||| ||||||||||| ||| ||| ||| |||||
Sbjct 690704 AGCCATTTGAACAATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGAT 690763
Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065
||| |||||| ||| | | |||||||| || |||||||| | || || |||||
Sbjct 690764 GTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTT 690823
Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125
|| | ||| ||| | | | || | || | ||||| || ||||| |
Sbjct 690824 CATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAAC 690883
Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185
||| |||||||| | || || | ||| | ||| || || || |||||||| | | |
Sbjct 690884 TTGGAATTCTCCGGCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACA 690943
Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245
||| ||| || | ||||| | ||| |||||| ||||||||||| || | | |
Sbjct 690944 TTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGA 691003
Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305
|| | | || ||| |||| | || | | | | ||||||||| | ||| ||
Sbjct 691004 GTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGA 691063
Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTT----ACTAGCATATGATCCAT 77361
||| || |||| | || ||||| || || || ||| | || || |
Sbjct 691064 AGGAGTGACGCCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGA----GAGCCTT 691119
Query 77362 TATATGTTTCATAAGGTCC---TTCTGTTTC-AGCTAGTTCACAACTCGCTTCCAATGCT 77417
|| ||||| || || || ||| || | | || | ||| | || || ||
Sbjct 691120 GGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCG---ACAGATGAGGTC-AAGGCA 691175
Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAA 77476
||| || || || || ||||||| | ||||| | |||| ||||| || ||
Sbjct 691176 GCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCTGGCGAGTCGAA 691234
Query 77477 CGGATAATGTAAAAG--AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGT 77534
||| | | || || || |||| |||| || | || ||||| |||| | | ||||||
Sbjct 691235 TGGAAGACG-AAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGATAGGT 691292
Query 77535 CTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATT 77594
| ||| | |||| || | |||||| | | |||||||| || || || || ||
Sbjct 691293 CGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATC 691352
Query 77595 TTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654
|| || | |||||||| || |||| || || || | || || | |||||| | ||
Sbjct 691353 TTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTT 691412
Query 77655 CCATCTATAAC-------AAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTAC 77707
|| || | | ||| || | | ||| || || || | ||||| || ||
Sbjct 691413 CCCTCATTCATGTTGACGAAAGTTGGT-AGAGCAATTGAAGCCAAGTTACAGCAAGCAAC 691471
Query 77708 CTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGT 77764
||||| | || ||| || | | ||||| || || | || | |||||
Sbjct 691472 CTCATCTG-GT--GCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGT 691528
Query 77765 GCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGT 77824
|| || || | |||||||||||| || ||||||| || || ||||| || || ||| |
Sbjct 691529 ACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATT 691588
Query 77825 CCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGA 77884
|||||||| | || | || | |||||| | ||||| | ||| || || ||
Sbjct 691589 TCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT---AGT 691645
Query 77885 TTTGTATCGCCTCTCTC------TTTCATA--TTGAGTATATAGCCGTTCAAATTCATCT 77936
||| || | || || ||||||| | ||| | ||| ||||| || ||
Sbjct 691646 CTTG---CGACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCC--TCAAACTCCTCG 691700
Query 77937 CCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCT 77996
|| ||||||| |||| |||||||||||||| |||||||| | | ||| || ||||
Sbjct 691701 CCATAAACATCTGCCAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTC 691760
Query 77997 TCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 78056
| | || || ||||| || | |||||| ||||| | ||| || ||||| || |
Sbjct 691761 TTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCG 691820
Query 78057 CTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGC 78116
| | |||||| || || ||||| ||||| |||||||| | || ||| | ||||
Sbjct 691821 CGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGC 691880
Query 78117 CATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATAT 78176
||||| || || || | || | | | || || ||||| ||||| |||||||| | ||||
Sbjct 691881 CATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATAT 691940
Query 78177 CTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTT 78236
|| || ||||| || |||||| | ||| |||| |||||| || || ||||||| ||
Sbjct 691941 CTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTA 692000
Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCC 78296
|| | || || ||| | || || || | |||| | || || || || ||
Sbjct 692001 CCGGCGATGTATGCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCA 692060
Query 78297 ATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356
|||| || || | || ||| ||||| |||||||||||||| || ||||| || ||
Sbjct 692061 TTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCT 692120
Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416
|||||| | || || || || | ||| || ||| || ||| ||| |
Sbjct 692121 TTCATGTCGATGAGGAAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGC 692180
Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476
|| || || ||||| ||||| | || | || | | ||||||||||| ||||| |
Sbjct 692181 GTTGGGGAAGCATGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTT 692240
Query 78477 TCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529
|| || || || | ||||| || || || |||||||| | ||| || |||||
Sbjct 692241 TCGATATCATCACCG-TGAATACCCACGGCAACACGCATGATCATTTGTTGAGG 692293
>seq9
Length=1212739
Score = 100 bits (110), Expect = 4e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
||||| ||||| || ||||||||||| | || | |||||| || || |||||
Sbjct 165469 CATGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGT 165410
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| | ||| || ||||| ||||||||||| || |||| || ||||||||||| |||||
Sbjct 165409 CCAGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAG 165350
Query 48261 ATGCCTTCTACGGCCGCAAATGC 48283
|| ||||| || || || |||||
Sbjct 165349 ATACCTTCAACAGCGGCGAATGC 165327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694663390266720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |