Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3 320 2e-82 seq9 111 2e-19 >seq3 Length=2126074 Score = 320 bits (354), Expect = 2e-82 Identities = 1330/2075 (64%), Gaps = 44/2075 (2%) Strand=Plus/Plus Query 75365 TTCTTATCCAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 ||||| ||||| |||| ||||| || | || || | | ||||||| ||||||||| Sbjct 690524 TTCTTGATCAACGGTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACAT 690583 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 || || || | ||||| ||||||| || ||||| ||| | ||| | Sbjct 690584 TCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGT 690643 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 ||||| || ||||| ||||| || ||| ||||||||| || || || | |||||| Sbjct 690644 AGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGC 690703 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||||| | ||| || ||||| ||||||||||| ||| ||| ||| ||||| Sbjct 690704 AGCCATTTGAACAATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGAT 690763 Query 75604 ATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 ||| |||||| || | | |||||||| ||||| ||||||| || || ||||| Sbjct 690764 GTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTT 690823 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || | ||| ||| | | || | || | ||||| || ||||||| Sbjct 690824 CATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAAC 690883 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 ||| |||||||| | || || | || | ||| || || || |||||||| | | | Sbjct 690884 TTGGAATTCTCCGGCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACA 690943 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 ||| ||| || | ||||| | ||| |||||| ||||||||||| || | | | Sbjct 690944 TTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGA 691003 Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 || | | || ||| |||| | || | | | | ||||||||| | ||| || Sbjct 691004 GTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGA 691063 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATA 75960 || || |||| | || ||||| || || ||| | || || | || Sbjct 691064 AGGAGTGACGCCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGAGAGCCTTGGTA 691123 Query 75961 TGTTTCGTAAGTCCC--GTCCTTTTCAGCTAGTTCG-CAACTCGCCTCTAACGCACCGTA 76017 |||||||| | || || | ||| || | ||| || | || || ||| ||| Sbjct 691124 AGTTTCGTACGGGCCAAGTTCCTTT--GCGATCTCGACAGATGAGGTC-AAGGCAGCGTG 691180 Query 76018 ATAAATTGTTTCGAAAATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTATCAAAAGGAT 76076 || || || || ||||||| | || || | |||| ||||| | || || ||| Sbjct 691181 GTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCTGGCGAGTCGAATGGAA 691239 Query 76077 AATGTAAAAG--AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATG 76134 | | || || || ||| ||||| || || || ||||| |||| | | ||||||| ||| Sbjct 691240 GACG-AAGAGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATG 691297 Query 76135 TCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATT 76194 | |||| || |||||| | | || ||||| || ||||| || || || || Sbjct 691298 ACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTT 691357 Query 76195 GAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC 76254 | ||||| || || |||| || || || | || || | |||||| | |||| || Sbjct 691358 CAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTC 691417 Query 76255 TATCA------CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATT 76308 ||| | || | ||||| || || || | ||||| || ||||||| Sbjct 691418 ATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATC 691477 Query 76309 AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATT 76368 | | || | | ||||| ||||| | || | ||||| ||||| || Sbjct 691478 TGGTGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTT 691537 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 | |||||||||||| ||||| |||| || || ||||| | || ||| |||| ||||| Sbjct 691538 CTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTC 691597 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCG 76488 | || | || | |||||| | ||||| | ||| || || || ||| | Sbjct 691598 GGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT---AGTCTTGCGACC 691654 Query 76489 CTTCTCTC---TTTCATAT-TGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543 ||| || ||||||| | | ||| | || ||||| || || || ||||||| Sbjct 691655 CTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCC--TCAAACTCCTCGCCATAAACATCT 691712 Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603 |||||||||| |||||||| || ||||| | | ||| || |||| | | || || Sbjct 691713 GCCAAACCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGC 691772 Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663 ||||| || | |||||| ||||| | ||| || ||||| || | | | |||||| Sbjct 691773 TTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCC 691832 Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || || ||||| ||||| || ||||| | || ||| | ||||||||| || || Sbjct 691833 TTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGG 691892 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || | || | | ||||||| ||||| ||||| |||||||| | |||||| |||||||| Sbjct 691893 TAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTG 691952 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 || |||||| | ||| |||| ||| || || || | ||||| || || | || || Sbjct 691953 TTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTAT 692012 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 ||| ||||| || | ||| || || || || || || | || ||||| Sbjct 692013 GCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATC 692072 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 | ||||| ||||| || || ||||| || || |||||||| || |||||| | Sbjct 692073 ATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATG 692132 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 || || || || | ||| || ||| || ||| ||| | || || || ||| Sbjct 692133 AGGAAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCA 692192 Query 77024 TGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCA 77082 || || || | || | || | | ||||||||||| ||| | ||| ||||| || Sbjct 692193 TGTGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCA 692252 Query 77083 TTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATT 77142 | ||||| || || || |||||||| | ||| || ||||| || || || ||| Sbjct 692253 CCG-TGAATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACC 692311 Query 77143 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 77200 || | || | |||||| || | || || || || || || | ||| |||| Sbjct 692312 ATCAAGACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAA 692371 Query 77201 AAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCC 77260 | || | || || | |||| | || || |||| |||| || | | | || || Sbjct 692372 A--TCCCGGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGACGCATTC- 692428 Query 77261 ATGACAGT---GGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTA 77317 || ||| | ||| || ||||| | | |||||||| || || ||| | Sbjct 692429 --GAAAGTTTCCTTGCTAATCATAGGAGAAGCTTTGCCATTTTTTGGGTTTGTATATTGG 692486 Query 77318 AATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACG 77377 |||| || || |||| | || | || || |||| ||||| || || ||||| Sbjct 692487 TATAAATCGCGGATAACGTGGGAGAACTGCTTCTTGGTTTGTTTGTGGAGGTTTGATACT 692546 Query 77378 GCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || || | |||||||||||| ||||| || ||||| Sbjct 692547 GCAATACGAGCAGCTAGAATGGCATAATCGGGATG 692581 >seq9 Length=1212739 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 ||||| ||||| || || |||||||| | || | |||||| || || ||||| Sbjct 165469 CATGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGT 165410 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 |||| ||| || ||||||||||||||||| || || | || ||||||||||| ||||| Sbjct 165409 CCAGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAG 165350 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAG 46778 || ||||| ||||| |||||||| || || Sbjct 165349 ATACCTTCAACAGCGGCGAATGCAACGAG 165321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712928848023360