Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq34 140 7e-28 seq18 113 1e-19 >seq34 Length=376069 Score = 140 bits (154), Expect = 7e-28 Identities = 159/210 (76%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| |||||||||||||| |||| | || | ||||| || | Sbjct 166325 CAAG-TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGA 166383 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| ||||||||||| | | ||| ||||| | | ||||| ||||| ||||| Sbjct 166384 GTTGCTTT--CCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCTTG 166441 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| | || | | |||| ||| ||| || || || || |||||||| Sbjct 166442 GATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTT 166501 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||| ||||| ||||||| |||||| Sbjct 166502 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531 >seq18 Length=877782 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| | ||| || ||||||||||||||||| |||| | ||||| ||||| Sbjct 575365 AGGACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCC 575424 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||| | || ||||| | | ||| || || || ||| Sbjct 575425 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCT 575484 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | | || || ||| || || | ||| || || Sbjct 575485 TGAATCTTAGCCTTCACATTGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTC 575544 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||||| |||||| Sbjct 575545 TTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 575576 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | ||| ||||||||||| || |||||||| || || | | || | Sbjct 575587 AGTCTGAGAACCAAATGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGAGAGGGTACGA 575646 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| || || ||||| |||||||| || | | || ||||| | | ||| || | Sbjct 575647 CCATCCTCAAGTTGCTTT--CCGGCGAAAATCAAACGTTGTTGGTCGGGTGGGATGCCCT 575704 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 | || |||||||| || |||||| | || | | || ||| || || || || | Sbjct 575705 CTTTGTCTTGAATCTTGGCTTTGACGTTATCGATAGTATCAGAAGATTCAACCTCGAGGG 575764 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | || || || || ||||| ||||| |||| Sbjct 575765 TGATGGTCTTTCCGGTGAGGGTCTTAACGA 575794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153811589986033