Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq34 132 3e-26
seq18 107 1e-18
seq5 96.9 2e-15
>seq34
Length=376069
Score = 132 bits (146), Expect = 3e-26
Identities = 160/216 (74%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185
||||||| |||||| ||| |||||||||||||||||| |||| || ||| | ||
Sbjct 166320 AACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 166379
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
|| || ||||| ||||| |||||||| ||||| || || | || | || ||||| ||
Sbjct 166380 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCT 166439
Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
||||| ||| || ||| | |||||||| | || || ||||| | || || |
Sbjct 166440 TGGATCTTGGCCTTGACATTGT--CGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAG 166497
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
| || |||||||||||||| |||||||| |||||||
Sbjct 166498 TTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 166533
>seq18
Length=877782
Score = 107 bits (118), Expect = 1e-18
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCG 44185
||||| ||| | ||||| |||||||| ||||||||||| ||||| || ||||
Sbjct 575139 CACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATCCAAAAGAGTTCT-GC-CGTCC 575196
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
|||| |||||| || || |||||||| ||||| ||||| | || | || ||||| |||
Sbjct 575197 TCCAACTGCTTTCCAGCGAAGATCAATCGCTGTTGATCAGGTGGAATGCCCTCCTTATCC 575256
Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| | | | || || || | ||||| ||||| | || || |||
Sbjct 575257 TGAATCTTAGCCTTGACATTATCAATAGTATCCGAAGATTCTACCTCTAATGTGATAGTC 575316
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || | |||||| || |||||||||||
Sbjct 575317 TTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|| |||||||||||||| |||| ||||| || | || || || ||||| || ||||
Sbjct 575386 TCTTTTTGGATGTTGTAGTCGGAAAGAGTT--CGGCCATCCTCAAGTTGCTTACCAGCAA 575443
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
|||| | ||| || || || | || | ||| || || || ||||| |||||
Sbjct 575444 AGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCTTGAATCTTAGCCTTCACAT 575503
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | ||||| || | || || ||||| | || || |||||||| ||||| ||||| |
Sbjct 575504 TGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTCTTTCCGGTGAGAGTCTTGA 575563
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 575564 CGAAGATCTGCAT 575576
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/188 (71%), Gaps = 6/188 (3%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| ||| |||||| || |||||||| || | ||| ||| | || ||
Sbjct 575880 ACGAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGACCATCTTCA 575939
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || || ||||||||||| ||||| | ||| | || ||||| ||
Sbjct 575940 AGTTGCTTGCCTGCGAAAATCAAACGCTGTTGATCGGGAGGAATCCCCTCCTTGTCTTGG 575999
Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| || ||| | || |||||| ||| || ||||| | || || |||
Sbjct 576000 ATCTT-GGCTTTGACATTGT--CAATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTC 576056
Query 44306 TTTCCCGT 44313
||||| ||
Sbjct 576057 TTTCCAGT 576064
>seq5
Length=1928780
Score = 96.9 bits (106), Expect = 2e-15
Identities = 133/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
||||||||||||||||||| | || || |||| || || ||||| || || ||||
Sbjct 1275123 CCTTTTGGATGTTGTAATCTGAAAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 1275182
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||||||| || ||||| | || | || ||||| || ||||| ||| || |||
Sbjct 1275183 TCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTGT 1275242
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | ||| || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 1275243 --CGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 1275300
Query 44326 GAAG 44329
||||
Sbjct 1275301 GAAG 1275304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359987666660391
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |