Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465935.1_202015-12- 14] 257 sequences; 43,359,131 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq236 87.8 4e-12 >seq236 Length=650478 Score = 87.8 bits (96), Expect = 4e-12 Identities = 181/267 (68%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || || | ||||||||| | || ||||| || || ||| || ||| Sbjct 519680 TGAATGTTGAGACCAATACCTCCAGCATTTTTAGAGATCATAGCACATGTCTTGAGGGTA 519739 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG- 94892 ||||||||||| ||||| ||||| || | | | | |||||||| || ||||| || Sbjct 519740 TCATAAATACCATCAATACTATCCTCCTTCATATCAATGAGGAAGCATGATGAAAGCTGT 519799 Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 | |||| ||| ||| || ||||| ||||| || || || || || | | || Sbjct 519800 GCTTGTG-GTGTACCAGCGGAGAAAAGTGTAGGGGAGGCGTGTGTGAAGTATTTGTTGGA 519858 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 ||| || | || || |||||| | | ||| || |||||||| || || || || Sbjct 519859 CATAAGGTTGTAGGTCTCAATGGCGCTCTCGATATCGTCACCGTGAATACCAACGGCAAC 519918 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTC 95039 |||||| ||||| | ||| || || || Sbjct 519919 ACGCATGATCATTTGCTGTGGACGTTC 519945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580741485435