Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465935.1_202015-12- 14] 257 sequences; 43,359,131 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq193 104 2e-17 >seq193 Length=590425 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 5597 TGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACC 5656 ||||| | || |||||| ||| ||||||||||| ||| ||| ||| ||||||| | Sbjct 245484 TGCGCAACACGATCGCCCTCCTTCACCTCGAAATCAGTGTCTCCGTGGTTAAACAGCAGC 245543 Query 5657 ACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGC 5716 || || | || || || || || || ||||||||||||||| |||||| | ||| Sbjct 245544 ACCTTTACTTGACCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCATGTGT 245603 Query 5717 TTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||| || ||||||||||||||||| | ||| |||| Sbjct 245604 TTGGATGCTAGGCCGGAGCGGGGAGCTATGCGTCCGT 245640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053052988984