Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465935.1_202015-12-
14] 257 sequences; 43,359,131 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq247 206 2e-47
seq112 206 2e-47
seq181 86.0 5e-11
>seq247
Length=916335
Score = 206 bits (228), Expect = 2e-47
Identities = 896/1401 (64%), Gaps = 17/1401 (1%)
Strand=Plus/Minus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| ||||| | ||||| |||||||| | ||| || ||||| || ||||| || ||
Sbjct 267663 GCAGAGACATTCATGATACCGTTGGCATCAATATCGAAGGTGACCTCGATTTGTGGAACA 267604
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|| | |||||||||| || || | | || |||| ||| || || || ||
Sbjct 267603 CCACGAGGAGCAGGTGGAATACCAGTGAGTTCGAACTTTCCGAGAAGGTTGTTGTCCTTT 267544
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
||| ||| ||||||||||| | ||| || || ||| ||| ||||| || |
Sbjct 267543 GTGCGCGTTCTCTCACCCTCGAAGACTTGAATCAAGACACCAGGTTGGTTATCGGAGAAG 267484
Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498
|| | || ||| || || || ||||| || ||||| | | ||| | ||||||
Sbjct 267483 GTAGAGAAGACTTCAGACTTCTTGGTGGGAATGGTGGTGTTGCGGTGAATGAGCTTGGTC 267424
Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558
|| ||||| || || || | ||||||||| | || | |||||| | || | ||
Sbjct 267423 ATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGCGCGACATCGAGAAGAAGGATC 267364
Query 517559 T--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615
| || | || || || | || | |||| || ||||| || || | ||||| ||
Sbjct 267363 TCGTTGGTAGACTTGGATGAAGTGTCACCAGAGAGGATAGCAGCCTGGACGGCAGCGCCG 267304
Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675
||||||||||| |||||||| || | | | ||| | | ||||| ||||| | |
Sbjct 267303 TATGCAACAGCCTCATCAGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGTAGTCG 267244
Query 517676 GAAAGAAGTTGTCT---TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732
| | || | ||| ||| | || ||||| | || || || || || || || ||
Sbjct 267243 GTGATGAGCT-TCTGGATACGT--GGGATACGGGTGGAACCACCGACCAAGACGATCTCG 267187
Query 517733 TGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGAC 517790
|| || ||| ||||| || | || | || | || || || ||||| |
Sbjct 267186 TGGACTCTG-GATTTGTCGATCTTGGCGTCAGCGAGGACACGGTCGACTGGGTTGGTGGT 267128
Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850
| || || | |||| |||||||| ||||| ||| | ||| | || | |
Sbjct 267127 G-GATCGGAAGAGGTCTTGGCAAAGTTCCTCGAAACGAGCACGAGTGATAGAGGTGTAGA 267069
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
| || || || ||||| | ||| || | ||| || | || || | || || || || |
Sbjct 267068 AGTCGATACCCTCGAAGAGAGAGTCGATTTCGATGGATGTCTGGGCAGAGGAGGAGAGGG 267009
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTC 517969
||| ||||||||||| ||||| || | || | || | || || | | || ||
Sbjct 267008 TACGCTTAGCACGTTCGCATGCAGTGCGGAGACGACGAAGAGCACGAGCGTTAGTGCTT- 266950
Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029
|||||| | || | || | |||||| || | || | | || ||||| || ||
Sbjct 266949 AAATCTTTCTTGTGCTTGCGCTTGAACTCGTTTACGAAGTGGTTAACGAGACGGTTGTCG 266890
Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089
|| || ||||| ||||| | ||| | || | || | | |||| || | || ||
Sbjct 266889 AAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACTTCAAAGATACCCTCC 266830
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| | ||| |||| ||||| |||||| ||||| | ||| || || || || ||
Sbjct 266829 TCAATGGTCAAGAGAGAAACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTT 266770
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
|| || || || || | ||| || |||| ||||| ||||| || || ||
Sbjct 266769 CGCTCACCCTCAACCTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCAGTAGGCTCGTTG 266710
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|| || | | |||||| ||||| || || ||||||||||| |||||||| | |||
Sbjct 266709 ATGATACGGAGAACATTGAGACCGGCGATGAGACCTGCATCTTTTGTGGCTTGACGTTGG 266650
Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329
|| ||| | || ||||| |||||||| | || || | | || | ||| | ||
Sbjct 266649 GAGTCGGTGAAGTATGCTGGAACAGTGACGACAGCGTTGTTGACGGTTCCACCGAGGTAG 266590
Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389
|| || || | |||| || || | ||| || || |||| ||| || | ||
Sbjct 266589 GCCTCAGCAGTCTCCCTCATCTTGACCAAGACCATCGAGGAGATTTCTTCGGGTGTGAAT 266530
Query 518390 TGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448
||||| | || |||| | ||||||| ||| || ||| | || ||
Sbjct 266529 TGCTTAGCCTCGCCCTTGA-ACTCGACTTCAATGACTGGCTTTCCGCCACGGTCGATGAC 266471
Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAAT 518508
|| ||||| ||| |||||||| | ||| || | |||| || | | ||| ||
Sbjct 266470 CTTGAATGGGAAGTGCTTCATATCAGCTTGGACTTCTGGGTCGGCGAATTTACGACCGAT 266411
Query 518509 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGC 518568
| || || ||||| || | || || || || || || || |||| | || || ||
Sbjct 266410 CAGACGCTTAGCATCGAAGACTGTGTTTGTAGGGTTCATGGCGACTTGGTTCTTTGCGGC 266351
Query 518569 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 518628
|||||| |||||| |||| || ||||| || | ||| | || |||||||| || || ||
Sbjct 266350 ATCTCCGATCAGACGTTCGGTGTCTGTGAAAGCAACGAACGAAGGAGTTGTTCGGTTTCC 266291
Query 518629 TTGATCATTCGCAATAATTTC 518649
||| || || || ||||||||
Sbjct 266290 TTGGTCGTTGGCGATAATTTC 266270
>seq112
Length=1448063
Score = 206 bits (228), Expect = 2e-47
Identities = 896/1401 (64%), Gaps = 17/1401 (1%)
Strand=Plus/Plus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| ||||| | ||||| |||||||| | ||| || ||||| || ||||| || ||
Sbjct 1246526 GCAGAGACATTCATGATACCGTTGGCATCAATATCGAAGGTGACCTCGATTTGTGGAACA 1246585
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|| | |||||||||| || || | | || |||| ||| || || || ||
Sbjct 1246586 CCACGAGGAGCAGGTGGAATACCAGTGAGTTCGAACTTTCCGAGAAGGTTGTTGTCCTTT 1246645
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
||| ||| ||||||||||| | ||| || || ||| ||| ||||| || |
Sbjct 1246646 GTGCGCGTTCTCTCACCCTCGAAGACTTGAATCAAGACACCAGGTTGGTTATCGGAGAAG 1246705
Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498
|| | || ||| || || || ||||| || ||||| | | ||| | ||||||
Sbjct 1246706 GTAGAGAAGACTTCAGACTTCTTGGTGGGAATGGTGGTGTTGCGGTGAATGAGCTTGGTC 1246765
Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558
|| ||||| || || || | ||||||||| | || | |||||| | || | ||
Sbjct 1246766 ATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGCGCGACATCGAGAAGAAGGATC 1246825
Query 517559 T--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615
| || | || || || | || | |||| || ||||| || || | ||||| ||
Sbjct 1246826 TCGTTGGTAGACTTGGATGAAGTGTCACCAGAGAGGATAGCAGCCTGGACGGCAGCGCCG 1246885
Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675
||||||||||| |||||||| || | | | ||| | | ||||| ||||| | |
Sbjct 1246886 TATGCAACAGCCTCATCAGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGTAGTCG 1246945
Query 517676 GAAAGAAGTTGTCT---TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732
| | || | ||| ||| | || ||||| | || || || || || || || ||
Sbjct 1246946 GTGATGAGCT-TCTGGATACGT--GGGATACGGGTGGAACCACCGACCAAGACGATCTCG 1247002
Query 517733 TGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGAC 517790
|| || ||| ||||| || | || | || | || || || ||||| |
Sbjct 1247003 TGGACTCTG-GATTTGTCGATCTTGGCGTCAGCGAGGACACGGTCGACTGGGTTGGTGGT 1247061
Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850
| || || | |||| |||||||| ||||| ||| | ||| | || | |
Sbjct 1247062 G-GATCGGAAGAGGTCTTGGCAAAGTTCCTCGAAACGAGCACGAGTGATAGAGGTGTAGA 1247120
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
| || || || ||||| | ||| || | ||| || | || || | || || || || |
Sbjct 1247121 AGTCGATACCCTCGAAGAGAGAGTCGATTTCGATGGATGTCTGGGCAGAGGAGGAGAGGG 1247180
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTC 517969
||| ||||||||||| ||||| || | || | || | || || | | || ||
Sbjct 1247181 TACGCTTAGCACGTTCGCATGCAGTGCGGAGACGACGAAGAGCACGAGCGTTAGTGCTT- 1247239
Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029
|||||| | || | || | |||||| || | || | | || ||||| || ||
Sbjct 1247240 AAATCTTTCTTGTGCTTGCGCTTGAACTCGTTTACGAAGTGGTTAACGAGACGGTTGTCG 1247299
Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089
|| || ||||| ||||| | ||| | || | || | | |||| || | || ||
Sbjct 1247300 AAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACTTCAAAGATACCCTCC 1247359
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| | ||| |||| ||||| |||||| ||||| | ||| || || || || ||
Sbjct 1247360 TCAATGGTCAAGAGAGAAACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTT 1247419
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
|| || || || || | ||| || |||| ||||| ||||| || || ||
Sbjct 1247420 CGCTCACCCTCAACCTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCAGTAGGCTCGTTG 1247479
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|| || | | |||||| ||||| || || ||||||||||| |||||||| | |||
Sbjct 1247480 ATGATACGGAGAACATTGAGACCGGCGATGAGACCTGCATCTTTTGTGGCTTGACGTTGG 1247539
Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329
|| ||| | || ||||| |||||||| | || || | | || | ||| | ||
Sbjct 1247540 GAGTCGGTGAAGTATGCTGGAACAGTGACGACAGCGTTGTTGACGGTTCCACCGAGGTAG 1247599
Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389
|| || || | |||| || || | ||| || || |||| ||| || | ||
Sbjct 1247600 GCCTCAGCAGTCTCCCTCATCTTGACCAAGACCATCGAGGAGATTTCTTCGGGTGTGAAT 1247659
Query 518390 TGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448
||||| | || |||| | ||||||| ||| || ||| | || ||
Sbjct 1247660 TGCTTAGCCTCGCCCTTGA-ACTCGACTTCAATGACTGGCTTTCCGCCACGGTCGATGAC 1247718
Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAAT 518508
|| ||||| ||| |||||||| | ||| || | |||| || | | ||| ||
Sbjct 1247719 CTTGAATGGGAAGTGCTTCATATCAGCTTGGACTTCTGGGTCGGCGAATTTACGACCGAT 1247778
Query 518509 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGC 518568
| || || ||||| || | || || || || || || || |||| | || || ||
Sbjct 1247779 CAGACGCTTAGCATCGAAGACTGTGTTTGTAGGGTTCATGGCGACTTGGTTCTTTGCGGC 1247838
Query 518569 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 518628
|||||| |||||| |||| || ||||| || | ||| | || |||||||| || || ||
Sbjct 1247839 ATCTCCGATCAGACGTTCGGTGTCTGTGAAAGCAACGAACGAAGGAGTTGTTCGGTTTCC 1247898
Query 518629 TTGATCATTCGCAATAATTTC 518649
||| || || || ||||||||
Sbjct 1247899 TTGGTCGTTGGCGATAATTTC 1247919
>seq181
Length=1902219
Score = 86.0 bits (94), Expect = 5e-11
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 671612 TCCAGAGGTTTTTGTCGA-AATTCTTTTATTGAGGGTCTTGGACCTTTTGAATTTTTCTT 671670
|| |||||||| || || ||||| | | || |||||| || |||||| |||||
Sbjct 874279 TCGAGAGGTTTC-GTTGAGAATTCATATCTTAGAGGTCTTACCCCCACTGAATTCTTCTT 874221
Query 671671 CCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACTGCTGATACTGG 671730
||| | ||||| |||||||||||| | || |||| || | || || || || |||||
Sbjct 874220 CCACGCCATGGCTGGTCGTGAAGGTTTGATCGATACTGCAGTCAAGACCGCAGAAACTGG 874161
Query 671731 TTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCAAACAAGAATATGATGGTAC 671790
||| |||||| | ||||| ||| || |||||| ||| ||||||| |||||
Sbjct 874160 TTACATTCAACGTCGTCTTGTCAAAGCTCTTGAAGATGTCATGGCGAAATATGACGGTAC 874101
Query 671791 AGTAAGAAA 671799
||| ||||
Sbjct 874100 AGTCCGAAA 874092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780809646813442
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