Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465935.1_202015-12-
14] 257 sequences; 43,359,131 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq182 120 4e-21
>seq182
Length=792865
Score = 120 bits (132), Expect = 4e-21
Identities = 210/300 (70%), Gaps = 13/300 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| |||||||||||||| || || ||||| || || ||| |||||
Sbjct 654299 GATCTGGCAAATGTAC-AAAAAGGCCGAGGCATCTTTCTGGACAGCAGAAGAGATCGACT 654357
Query 1455835 TCG----GCGCCGACACGGTCCACTGGG-TGTCG--CTGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| | ||| | | || | || || |||||| |||||
Sbjct 654358 TGTCAAAGGACCTTCACGAT----TGGAATAACAAACTCAATGATGATGAGCGCTATTTC 654413
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| ||||||||||| || || ||| || ||| || || || ||||||||| |
Sbjct 654414 ATCTCTCACGTCCTCGCATTCTT-CGCAGCATCCGACGGAATAGTCAACGAGAACCTTGT 654472
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| ||||| | || || ||| | || ||||| |||| || ||||| ||||| ||
Sbjct 654473 CGAGCGCTTCAGTGGTGAAGTTCAAATCCCCGAGGCTCGTTGCTTCTACGGTTTCCAAAT 654532
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||||| ||||| ||||| ||||| ||||| || ||| | |||||
Sbjct 654533 TATGATGGAGAACATCCACTCCGAAACATACTCTCTCCTCATCGATACATACATTAAGGA 654592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177786411877634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |