Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465935.1_202015-12- 14] 257 sequences; 43,359,131 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq247 316 6e-81 seq112 316 6e-81 seq89 149 2e-30 seq181 136 1e-26 seq203 120 9e-22 seq202 104 7e-17 seq188 87.8 5e-12 >seq247 Length=916335 Score = 316 bits (350), Expect = 6e-81 Identities = 954/1462 (65%), Gaps = 26/1462 (2%) Strand=Plus/Plus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || |||||||| |||||||| || || || || | | | | |||| | | Sbjct 266209 TATCGGTATCGATTTGGGTACTACCTACTCGTGCGTGGGCATCTTCCGTGATGACAGAAT 266268 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 ||||| || || || || ||||| ||| ||||||| || || | |||||| || || || Sbjct 266269 CGAAATTATCGCCAACGACCAAGGAAACCGAACAACTCCTTCGTTCGTTGCTTTCACAGA 266328 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || || ||| |||| || ||| | ||||| || |||| || || || | ||| || Sbjct 266329 CACCGAACGTCTGATCGGAGATGCCGCAAAGAACCAAGTCGCCATGAACCCTACAAACAC 266388 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAAT 349436 || || ||||||||||| || || ||| | | || | ||| || || ||| Sbjct 266389 AGTCTTCGATGCTAAGCGTCTGATCGGTCGTAAATTCGCCGACCCAGAAGTC----CAAG 266444 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||||| | || || || || || | || | | | | | || || ||| | |||| Sbjct 266445 CTGATATGAAGCACTTCCCATTCAAGGTCAT--CGACCGTGGCGGA-AAGCCAGTCATTG 266501 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 | || || | || || || || ||||| |||||||||||| || || ||||| | Sbjct 266502 AAGTCGAGTTCAAGGGCGAGGCTAAGCAATTCACACCCGAAGAAATCTCCTCGATGGTCT 266561 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||| ||| | |||||| || || | |||| ||| || | | ||||| Sbjct 266562 TGGTCAAGATGAGGGAGACTGCTGAGGCCTACCTCGGTGGAACCGTCAACAACGCTGTCG 266621 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| ||||| || || | || |||| ||| || ||||||||||| || || Sbjct 266622 TCACTGTTCCAGCATACTTCACCGACTCCCAACGTCAAGCCACAAAAGATGCAGGTCTCA 266681 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | |||||||| | || || || || || ||||| || || ||||| || | Sbjct 266682 TCGCCGGTCTCAATGTTCTCCGTATCATCAACGAGCCTACTGCAGCTGCCATTGCTTACG 266741 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | | || || | | ||| || ||| |||| || || ||| | ||||| || | Sbjct 266742 GTTTGGACAAGAAGGTTGAGGGTGAGCGAAACGTTCTCATCTTCGATCTTGGTGGAGGAA 266801 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || | || |||| ||||| || |||||||| || | || || | Sbjct 266802 CCTTCGATGTTTCTCTCTTGACCATTGAGGAGGGTATCTTTGAAGTCAAGTCCACCGCCG 266861 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || || ||||||||| || || || || | Sbjct 266862 GTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTTAACCACTTCGTAAACG 266921 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | | ||| || | || | ||||| || Sbjct 266922 AGTTCAAGCG-CAAGCACAAGAAAGATTTAAGCACTAACGCTCGTGCTCTTCGTCGTCTC 266980 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | ||||| || ||||||||||||||| || | || || || |||| || || || ||| Sbjct 266981 CGCACTGCATGCGAACGTGCTAAGCGTACCCTCTCCTCCTCTGCCCAGACATCCATCGAA 267040 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || | || |||| | ||||| || |||||||| || || Sbjct 267041 ATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCTATCACTCGTGCTCGTTTCGAG 267100 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 ||| | || || || || || | || | | || || || || | || Sbjct 267101 GAACTTTGCCAAGACCTCTTCCGATCCACCACCAACCCAGTCGACCGTGTCCTCGCTGAC 267160 Query 350156 GCAAAAATGTCCAAAAAT-CAGA-TTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 || || | || | |||| |||| | | || | || || || |||||||| || |||| Sbjct 267161 GCCAAGA--TCGACAAATCCAGAGTCCACGAGATCGTCTTGGTCGGTGGTTCCACCCGTA 267218 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA 350273 | ||| | || || | | | || | || || || || || || | || | Sbjct 267219 TCCCACGTATCCAGAAGCTCATCACCGACTACTTCAACGGTAAGGAGCCAAACAAGTCCA 267278 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| ||||||||||| || ||||| || ||||| |||| | ||||| Sbjct 267279 TCAACCCTGATGAGGCTGTTGCATACGGCGCTGCCGTCCAGGCTGCTATCCTCTCTGG-- 267336 Query 350334 ATAAGAGTTC-TAAAATT-----GATGATCTATTACTACTAGATGTAACTCCACTTTCGC 350387 | | | ||| | || | | || | | || || ||||| | ||| | || | Sbjct 267337 -TGACACTTCATCCAAGTCTACCAACGAGATCCTTCTTCTCGATGTCGCGCCATTGTCTC 267395 Query 350388 TTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTAC 350447 |||| | || ||| |||||| | |||||| || |||| | || | || | | Sbjct 267396 TTGGTATCGAGACTGCTGGTGGACAAATGACCAAGCTCATTCACCGCAACACCACCATTC 267455 Query 350448 CTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTC 350507 | || || ||||| || || ||||| || | ||||| || || | || |||| Sbjct 267456 CCACCAAGAAGTCTGAAGTCTTCTCTACCTTCTCCGATAACCAACCTGGTGTCTTGATTC 267515 Query 350508 AAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCC 350567 |||| || || ||||| | | ||||| || || || || || ||| | || | Sbjct 267516 AAGTCTTCGAGGGTGAGAGAACGCGCACAAAGGACAACAACCTTCTCGGAAAGTTCGAAC 267575 Query 350568 TAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTG 350627 | | || |||||||| ||| | || ||||| || || || ||| | |||||||||| Sbjct 267576 TCACTGGTATTCCACCTGCTCCTCGTGGTGTTCCACAAATCGAGGTCACCTTCGATATTG 267635 Query 350628 ATTCAAATGGTATTTTAAATGT 350649 || | || ||||| | ||||| Sbjct 267636 ATGCCAACGGTATCATGAATGT 267657 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||| || || |||||||| || || || || || Sbjct 302593 CATACCACCACGGAGACGAAGGACCAAATGCAGTGTGGACTCTTTCTGGATGTTGTAGTC 302652 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| || || ||||| |||||||| || ||||||||||| ||||||||||| || || Sbjct 302653 TGATAGAGTGCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCCGG 302712 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || ||||| || || || | ||| || || || || | ||| || | || Sbjct 302713 TGGGATACCCTCCTTATCTTGGATCTTTGATTTCACGTTGTCGATGGTATCTGACGACTC 302772 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | ||| | |||||||||||| ||||| || || || || ||||| Sbjct 302773 AACCTCCAATGTGATTGTCTTTCCGGTAAGTGTCTTGACGAAGATTTGCAT 302823 Score = 127 bits (140), Expect = 6e-24 Identities = 159/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || || ||||| ||||||||||| |||||||| || | Sbjct 303097 TTTGCATACCGCCACGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTTTGAATGTTGT 303156 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || ||||||||||||||||| || || ||||| | || || || | Sbjct 303157 AGTCGCTCAAGGTACGGCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAGCGCTGTTGGT 303216 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || |||||||| || ||||||||||| || ||| ||||| || || || | ||| | | Sbjct 303217 CCGGGGGAATTCCCTCCTTATCCTGAATCTT-GCTCTTTACGTTGTCGATGGTATC-GCT 303274 Query 140682 GG-TTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || || || | ||||| ||||| Sbjct 303275 GGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 303307 Score = 118 bits (130), Expect = 3e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | ||||| || || |||||||| || || | Sbjct 302817 TTTGCATACCACCACGAAGGCGGAGCACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGT 302876 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || |||||||| |||||||| ||||| ||||| | |||||| |||| Sbjct 302877 AGTCGCTCAGGGTGCGACCATCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGTTGAT 302936 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || ||||| || || | || ||||| || || | || || | Sbjct 302937 CCGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACG 302996 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || ||||| || | ||||| || || || || || || Sbjct 302997 ACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGAC 303039 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || ||||| || |||||||| | |||| ||||| || | || ||||||||||| Sbjct 302404 CTCCTTCTGAATGTTGTAATCAGAAAGAGTTCTGCCATCCTCCAACTGCTTTCCAGCAAA 302463 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| | || || || || || || || || || || || ||||| || | || ||||| Sbjct 302464 GATCAATCGCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGAATCTTTGACTTGACATT 302523 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||||| | ||| || | ||| ||||| | ||||| |||||||| || | || || || Sbjct 302524 GTCAATGGTATCTGACGATTCCACTTCCAATGTAATGGTCTTTCCAGTCAAAGTCTTGAC 302583 Query 140726 AAAAATCTGCAT 140737 || |||||||| Sbjct 302584 GAAGATCTGCAT 302595 >seq112 Length=1448063 Score = 316 bits (350), Expect = 6e-81 Identities = 954/1462 (65%), Gaps = 26/1462 (2%) Strand=Plus/Minus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || |||||||| |||||||| || || || || | | | | |||| | | Sbjct 1247980 TATCGGTATCGATTTGGGTACTACCTACTCGTGCGTGGGCATCTTCCGTGATGACAGAAT 1247921 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 ||||| || || || || ||||| ||| ||||||| || || | |||||| || || || Sbjct 1247920 CGAAATTATCGCCAACGACCAAGGAAACCGAACAACTCCTTCGTTCGTTGCTTTCACAGA 1247861 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || || ||| |||| || ||| | ||||| || |||| || || || | ||| || Sbjct 1247860 CACCGAACGTCTGATCGGAGATGCCGCAAAGAACCAAGTCGCCATGAACCCTACAAACAC 1247801 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAAT 349436 || || ||||||||||| || || ||| | | || | ||| || || ||| Sbjct 1247800 AGTCTTCGATGCTAAGCGTCTGATCGGTCGTAAATTCGCCGACCCAGAAGTC----CAAG 1247745 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||||| | || || || || || | || | | | | | || || ||| | |||| Sbjct 1247744 CTGATATGAAGCACTTCCCATTCAAGGTCAT--CGACCGTGGCGGA-AAGCCAGTCATTG 1247688 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 | || || | || || || || ||||| |||||||||||| || || ||||| | Sbjct 1247687 AAGTCGAGTTCAAGGGCGAGGCTAAGCAATTCACACCCGAAGAAATCTCCTCGATGGTCT 1247628 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||| ||| | |||||| || || | |||| ||| || | | ||||| Sbjct 1247627 TGGTCAAGATGAGGGAGACTGCTGAGGCCTACCTCGGTGGAACCGTCAACAACGCTGTCG 1247568 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| ||||| || || | || |||| ||| || ||||||||||| || || Sbjct 1247567 TCACTGTTCCAGCATACTTCACCGACTCCCAACGTCAAGCCACAAAAGATGCAGGTCTCA 1247508 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | |||||||| | || || || || || ||||| || || ||||| || | Sbjct 1247507 TCGCCGGTCTCAATGTTCTCCGTATCATCAACGAGCCTACTGCAGCTGCCATTGCTTACG 1247448 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | | || || | | ||| || ||| |||| || || ||| | ||||| || | Sbjct 1247447 GTTTGGACAAGAAGGTTGAGGGTGAGCGAAACGTTCTCATCTTCGATCTTGGTGGAGGAA 1247388 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || | || |||| ||||| || |||||||| || | || || | Sbjct 1247387 CCTTCGATGTTTCTCTCTTGACCATTGAGGAGGGTATCTTTGAAGTCAAGTCCACCGCCG 1247328 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || || ||||||||| || || || || | Sbjct 1247327 GTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTTAACCACTTCGTAAACG 1247268 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | | ||| || | || | ||||| || Sbjct 1247267 AGTTCAAGCG-CAAGCACAAGAAAGATTTAAGCACTAACGCTCGTGCTCTTCGTCGTCTC 1247209 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | ||||| || ||||||||||||||| || | || || || |||| || || || ||| Sbjct 1247208 CGCACTGCATGCGAACGTGCTAAGCGTACCCTCTCCTCCTCTGCCCAGACATCCATCGAA 1247149 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || | || |||| | ||||| || |||||||| || || Sbjct 1247148 ATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCTATCACTCGTGCTCGTTTCGAG 1247089 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 ||| | || || || || || | || | | || || || || | || Sbjct 1247088 GAACTTTGCCAAGACCTCTTCCGATCCACCACCAACCCAGTCGACCGTGTCCTCGCTGAC 1247029 Query 350156 GCAAAAATGTCCAAAAAT-CAGA-TTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 || || | || | |||| |||| | | || | || || || |||||||| || |||| Sbjct 1247028 GCCAAGA--TCGACAAATCCAGAGTCCACGAGATCGTCTTGGTCGGTGGTTCCACCCGTA 1246971 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA 350273 | ||| | || || | | | || | || || || || || || | || | Sbjct 1246970 TCCCACGTATCCAGAAGCTCATCACCGACTACTTCAACGGTAAGGAGCCAAACAAGTCCA 1246911 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| ||||||||||| || ||||| || ||||| |||| | ||||| Sbjct 1246910 TCAACCCTGATGAGGCTGTTGCATACGGCGCTGCCGTCCAGGCTGCTATCCTCTCTGG-- 1246853 Query 350334 ATAAGAGTTC-TAAAATT-----GATGATCTATTACTACTAGATGTAACTCCACTTTCGC 350387 | | | ||| | || | | || | | || || ||||| | ||| | || | Sbjct 1246852 -TGACACTTCATCCAAGTCTACCAACGAGATCCTTCTTCTCGATGTCGCGCCATTGTCTC 1246794 Query 350388 TTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTAC 350447 |||| | || ||| |||||| | |||||| || |||| | || | || | | Sbjct 1246793 TTGGTATCGAGACTGCTGGTGGACAAATGACCAAGCTCATTCACCGCAACACCACCATTC 1246734 Query 350448 CTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTC 350507 | || || ||||| || || ||||| || | ||||| || || | || |||| Sbjct 1246733 CCACCAAGAAGTCTGAAGTCTTCTCTACCTTCTCCGATAACCAACCTGGTGTCTTGATTC 1246674 Query 350508 AAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCC 350567 |||| || || ||||| | | ||||| || || || || || ||| | || | Sbjct 1246673 AAGTCTTCGAGGGTGAGAGAACGCGCACAAAGGACAACAACCTTCTCGGAAAGTTCGAAC 1246614 Query 350568 TAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTG 350627 | | || |||||||| ||| | || ||||| || || || ||| | |||||||||| Sbjct 1246613 TCACTGGTATTCCACCTGCTCCTCGTGGTGTTCCACAAATCGAGGTCACCTTCGATATTG 1246554 Query 350628 ATTCAAATGGTATTTTAAATGT 350649 || | || ||||| | ||||| Sbjct 1246553 ATGCCAACGGTATCATGAATGT 1246532 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||| || || |||||||| || || || || || Sbjct 1211596 CATACCACCACGGAGACGAAGGACCAAATGCAGTGTGGACTCTTTCTGGATGTTGTAGTC 1211537 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| || || ||||| |||||||| || ||||||||||| ||||||||||| || || Sbjct 1211536 TGATAGAGTGCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCCGG 1211477 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || ||||| || || || | ||| || || || || | ||| || | || Sbjct 1211476 TGGGATACCCTCCTTATCTTGGATCTTTGATTTCACGTTGTCGATGGTATCTGACGACTC 1211417 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | ||| | |||||||||||| ||||| || || || || ||||| Sbjct 1211416 AACCTCCAATGTGATTGTCTTTCCGGTAAGTGTCTTGACGAAGATTTGCAT 1211366 Score = 127 bits (140), Expect = 6e-24 Identities = 159/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || || ||||| ||||||||||| |||||||| || | Sbjct 1211092 TTTGCATACCGCCACGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTTTGAATGTTGT 1211033 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || ||||||||||||||||| || || ||||| | || || || | Sbjct 1211032 AGTCGCTCAAGGTACGGCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAGCGCTGTTGGT 1210973 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || |||||||| || ||||||||||| || ||| ||||| || || || | ||| | | Sbjct 1210972 CCGGGGGAATTCCCTCCTTATCCTGAATCTT-GCTCTTTACGTTGTCGATGGTATC-GCT 1210915 Query 140682 GG-TTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || || || | ||||| ||||| Sbjct 1210914 GGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 1210882 Score = 118 bits (130), Expect = 3e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | ||||| || || |||||||| || || | Sbjct 1211372 TTTGCATACCACCACGAAGGCGGAGCACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGT 1211313 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || |||||||| |||||||| ||||| ||||| | |||||| |||| Sbjct 1211312 AGTCGCTCAGGGTGCGACCATCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGTTGAT 1211253 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || ||||| || || | || ||||| || || | || || | Sbjct 1211252 CCGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACG 1211193 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || ||||| || | ||||| || || || || || || Sbjct 1211192 ACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGAC 1211150 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || ||||| || |||||||| | |||| ||||| || | || ||||||||||| Sbjct 1211785 CTCCTTCTGAATGTTGTAATCAGAAAGAGTTCTGCCATCCTCCAACTGCTTTCCAGCAAA 1211726 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| | || || || || || || || || || || || ||||| || | || ||||| Sbjct 1211725 GATCAATCGCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGAATCTTTGACTTGACATT 1211666 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||||| | ||| || | ||| ||||| | ||||| |||||||| || | || || || Sbjct 1211665 GTCAATGGTATCTGACGATTCCACTTCCAATGTAATGGTCTTTCCAGTCAAAGTCTTGAC 1211606 Query 140726 AAAAATCTGCAT 140737 || |||||||| Sbjct 1211605 GAAGATCTGCAT 1211594 >seq89 Length=741344 Score = 149 bits (164), Expect = 2e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||||| | || || | |||||||| || || ||||| || || || || || Sbjct 321518 CCACCACGTAGACGAAGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAA 321577 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || |||||||| ||||| || || || ||||| ||||||||||||||||| || Sbjct 321578 AGGGTGCGTCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGATCAGGTGGG 321637 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||| || || ||||| || || | || ||||| || || | |||||| | |||||| Sbjct 321638 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGATTCAACC 321697 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || || || || ||||| || || |||||||| Sbjct 321698 TCGAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 321744 >seq181 Length=1902219 Score = 136 bits (150), Expect = 1e-26 Identities = 209/294 (71%), Gaps = 8/294 (3%) Strand=Plus/Plus Query 378184 TCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTT 378243 |||||| | |||| | |||||| | ||||| | ||| || || ||| ||||||||| Sbjct 874107 TCATATTTCGCCATGACATCTTCAAGAGCTTTGACAAGACGACGTTGAATGTAACCAGTT 874166 Query 378244 TGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAAT 378303 | || || ||||||||||| || ||||| |||||||| |||| || |||||||| Sbjct 874167 TCTGCGGTCTTGACTGCAGTATCGATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAG 874226 Query 378304 AATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGC 378363 |||||||| || ||||| || | || | ||||| |||||| || ||||| | | || Sbjct 874227 AATTCAGTGGGGGTAAGACCTCTAAGATATGAATTCTCAACGAAACCTCTCGATTCAGGA 874286 Query 378364 GAATCATCATATTTTGTATAATGAGGTAATGTAC-GATTCTCAAACCCATATGGAATTCG 378422 || | ||||| || || |||| ||||| || | | | | ||||| | | || || || Sbjct 874287 GAGTAATCATCCTTAGTGAAATGCGGTAAAGTTCTGTATTTGAAACCGA-ACGGGATACG 874345 Query 378423 TTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCAATATT 378473 || || || ||| ||| |||| | |||||||| |||||| | ||||| Sbjct 874346 CTTACCCTCGACAGACTGCTGACCCACGAGTGCAGA---CATTTGGGAGATATT 874396 >seq203 Length=1436653 Score = 120 bits (132), Expect = 9e-22 Identities = 244/363 (67%), Gaps = 6/363 (2%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | |||||| |||||| | | |||| |||||||| ||||| Sbjct 1005479 AAGATGAAGGAGACTGCTGAGGCATATCTCACCAAGCCAGTTCAAAATGCTGTTGTTACT 1005420 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || || || | || || ||||||||||| || ||| || || Sbjct 1005419 GTTCCCGCCTACTTCAACGACTCACAACGCCAGGCAACAAAAGACGCAGGCCAAATCGCC 1005360 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || || || ||||| ||| || |||| ||||| |||||||| ||| |||| || || || Sbjct 1005359 GGTTTGAACGTTCTCAGAGTGGTTAACGAACCTACTGCTGCCGCACTTGCCTACGGTCTC 1005300 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || ||| ||| | || ||| |||| | | ||||| ||||| || || || Sbjct 1005299 GAGAAA------GACGAGGACAAAGTTATTGCCGTCTACGATTTGGGTGGAGGAACCTTC 1005246 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 ||| | || | || | | || |||| |||| ||||| || | || |||||| Sbjct 1005245 GATATCTCTGTCCTCGAAATACAAAAGGGTGTTTTCGAAGTCAAGTCTACAAATGGTGAC 1005186 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921 || || | ||||| ||||| || |||| || || ||| || || || || |||| Sbjct 1005185 ACTCACTTGGGTGGTGAAGACTTCGATATTCACCTTGTTCGCCACTTGGTGCAACAATTC 1005126 Query 349922 AAG 349924 ||| Sbjct 1005125 AAG 1005123 >seq202 Length=271491 Score = 104 bits (114), Expect = 7e-17 Identities = 720/1148 (63%), Gaps = 39/1148 (3%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| || || | ||| || | | |||||||||||| | || ||| |||| || Sbjct 57134 CCAGAAGAGATCTCCGCCATGATTCTTGGTAAAATGAAGGATGTCGCCGAATCATACTTG 57193 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | |||||| |||| || |||||||| || || ||| |||| | Sbjct 57194 GGAAAGAAGGTCACCCACGCTGTTGTTACAGTTCCAGCCTACTTCAACGATAACCAGAGA 57253 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || | |||||| || || | || || | || | |||||| Sbjct 57254 CAAGCCACTAAGGATGCCGGTACCATTGCCGGTTTGGAAGTCCTTCGTATCGTCAATGAA 57313 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || ||||| ||||| || || | || || || ||| |||| | || Sbjct 57314 CCCACCGCCGCAGCTATTGCCTACGGTTTGGACAA---GACTGAAGGAGAACGTCAAATC 57370 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 | | | ||| | ||||| || ||||| ||||| || || || | | || || Sbjct 57371 ATCGTCTACGATCTCGGTGGAGGAACTTTCGATGTTTCCCTTCTTTCCATCGACCGTGGT 57430 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 |||| || || |||| || ||||| || || | || ||||||||||| ||| | Sbjct 57431 GTTTTCGAGGTCCTTTCAACCGCCGGTGACACTCACTTGGGAGGAGAAGATTTCGATCAA 57490 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA----ATTGATATTGG 349947 | || || | || | || ||| ||| |||| || | || || Sbjct 57491 AGAGTCATTAACTACTTCGCCAAGAAATATAA----CAAGGAGAACAGCGTCGACATCAC 57546 Query 349948 AGATAATC-CTAGAGCAATGCGTCGCCTAAGAACTGCGTG----TGAACGTGCTAAGCGT 350002 | ||| | ||| | ||| || || | ||||| ||| || |||||| Sbjct 57547 GAAGGATCTCAAGA-CTATGGGTAAACTCA----AGCGTGAAGCTGAGAAGGCCAAGCGT 57601 Query 350003 TCCTTATCAT-CTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGA 350061 | || || | | | | | | || | |||||||| || | | ||||||| || Sbjct 57602 ACTTTGTCTTCCCAAAAGACTACCCGC-ATTGAAATCGAAGCGTTCCACAATGGCAACGA 57660 Query 350062 TTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGC 350121 |||| | || |||| | || ||| || || | ||||||||| || | || Sbjct 57661 CTTCTCTGAGACTCTTACCAGAGCCAAGTTCGAGGAGCTCAATATGGATCTCTTCA-AGA 57719 Query 350122 A-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTG 350180 | || | | ||||| ||| |||| | || || || || | || || || ||| Sbjct 57720 AGACTCTCAAACCTGTCGAACAAGTTCTCAAGGACGCTAAGGTCAAGAAGAACGAGGTTG 57779 Query 350181 ATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTG 350240 |||| | || || || |||||||| || ||||||||||| ||| ||| ||| || Sbjct 57780 ATGACATCGTCTTGGTCGGTGGTTCCACTCGTATTCCAAAGGTT---CAGGAACTCATTG 57836 Query 350241 AG--TTTTTTAATGGCAAAGAA--CCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 || | || | ||||| || | || || || || ||||| ||||| || Sbjct 57837 AGGAATACTTCGGAGGTAAGAAGGCCAGCAAG-GGTATCAACCCTGATGAGGCTGTCGCT 57895 Query 350297 TATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGAT 350356 | ||||| |||||||| | | |||| || ||| | | || | |||||| Sbjct 57896 TTCGGTGCCGCTGTTCAAGGTGGTGTTTTGTCCGGAGAGGAAGGT------ACTGATGAC 57949 Query 350357 CTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATG 350416 | | || | ||||| | ||| | | ||||| | || ||| |||| | || ||| Sbjct 57950 ATCGTTCTCATGGATGTCAACCCATTGACTCTTGGTATTGAGACTACTGGAGGTGTTATG 58009 Query 350417 ACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACA 350476 || | || || ||||| | | | ||||| || || |||| || || ||| Sbjct 58010 ACCAAGTTGATCCCAAGAAACACCGTTATCCCTACCCGCAAATCTCAAATCTTCTCCACA 58069 Query 350477 TTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACT 350536 || || || || || | || |||||||| | |||||| || |||||| || Sbjct 58070 GCCGCCGACAACCAACCCGTAGTCCTGATTCAAGTCTATGAAGGAGAGCGTGCTTTGACA 58129 Query 350537 AAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGA 350596 ||||| || || || ||||| |||| | | || ||||||||| || | || Sbjct 58130 AAAGACAACAACAACCTTGGTAAATTCGAATTGACTGGTATTCCACCAGCACCACGTGGT 58189 Query 350597 GTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCA 350656 |||||||| |||||||| || ||||| |||| | ||||| || || || |||||||| Sbjct 58190 GTTCCTCAAATTGAAGTTTCCTTCGAACTTGACGCCAATGGAATCTTGAAGGTTACCGCT 58249 Query 350657 GTTGAAAA 350664 | ||| || Sbjct 58250 GGTGACAA 58257 >seq188 Length=597364 Score = 87.8 bits (96), Expect = 5e-12 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 350142 AAGTATTAAAAGATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGG 350199 |||| | || ||||| || || | | ||||| || ||||||| | || | ||||| Sbjct 200643 AAGTTCTCAAGGATGCTAACAT--CGACAAATCCAAGGTTGATGAGATCGTCCTTGTTGG 200586 Query 350200 TGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA 350259 ||| ||||| |||||||| || |||||| || | | ||||| || || || ||||| Sbjct 200585 TGGATCTACCCGTATTCCCAAGGTTCAAAAGCTCTTGAGCGAGTTCTTCAACGG-AAAGA 200527 Query 350260 ACCTTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCA 350317 | || ||| | ||||| || ||||| |||||||| || |||||||||||||| || Sbjct 200526 AG-TTGGAGAAAAGCATTAACCCTGATGAGGCTGTTGCTTACGGTGCTGCTGTTCAAGCG 200468 Query 350318 TCTATTTTATCTGGAAA 350334 ||| | || ||||| Sbjct 200467 GGTATCCTCTCAGGAAA 200451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249410551371