Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465945.1_202015-12-
14] 231 sequences; 42,266,283 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq199 105 8e-18
>seq199
Length=820378
Score = 105 bits (116), Expect = 8e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241
||||||||| || || || || || ||||| || ||||||||||||||||||||||| ||
Sbjct 626070 TACACCAATTGGTCCAACACCTGGTCCTCCGCCACCATGTGGAATACAGAATGTCTTGTG 626011
Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301
| || |||||||| ||||| |||||| |||| || | || | || ||
Sbjct 626010 AAGGTTGAGATGACAGACATCAGCACCAATCTCACCAGGCGAACACAACCCAATTTGAGC 625951
Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361
||| | ||| ||||| || | || || ||||| || | | |||||| || | ||| |
Sbjct 625950 ATTCATATTGGCACCGTCCATGTAGACTTGACCGCCGTGCTGATGAACAATATCACA-AG 625892
Query 138362 CTGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415
| | | | || | || || |||||||| || ||| ||||||||||||||
Sbjct 625891 CAGCCTTAATCTCTGGCTCGAATACACCGAATGTACTTGGGTATGTAATCATAAT 625837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578996728142120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |