Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14127 120 5e-22
>SEQ14127
Length=21342
Score = 120 bits (132), Expect = 5e-22
Identities = 236/338 (70%), Gaps = 12/338 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| |||| || || ||||| | |||||| |||| ||
Sbjct 14037 ATCTGGCAAATGTACAAAAAGGCCGAGGCATCTTTCTGGACAGCAGAAGAGATCGACTTG 14096
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| |||||||| |||||||| | | | | ||| |||||| | || || ||
Sbjct 14097 TCAAAGGACCTTCACGATTGGAATAACAAACTCAATGATGATGAGCGCTATTTCATCTCT 14156
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197
||| | | || ||||| || | ||||| ||||| |||||||| || | ||| || ||
Sbjct 14157 CACGTCCTCGCATTCTTCGCAGCATCCGACGGAATAGTCAACGAGAACCTTGTCGA-GCG 14215
Query 125198 ATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255
||| | | |||| | || || |||| ||| ||||| ||||| |||||||| |||
Sbjct 14216 CTTCAGTGGTGAAGTTCA-AATCCCCGAGG-CTCGTTGCTTCTACGGTTTCCAAATTATG 14273
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC-- 125313
|| ||||| | ||||| |||| |||||| || || || | ||||| || |
Sbjct 14274 ATGGAGAATATCCACTCCGAAACATACTCTCTCCTCATCGATACATACATCAAGGAACAA 14333
Query 125314 -CGCAACGTAAACACATGCTCTTTAACGCAATCGACAC 125350
| ||||| |||| || ||||| || ||||| || ||
Sbjct 14334 GCCCAACG--AACATAT-CTCTTCAATGCAATTGAGAC 14368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740919000862600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |