Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08- 07] 15,135 sequences; 48,719,559 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value SEQ14665 82.4 6e-11 >SEQ14665 Length=6019 Score = 82.4 bits (90), Expect = 6e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || || ||||||||||| ||||| |||||| || ||| | | || Sbjct 2224 AGGACGAGATGGAGAGTAGACTCCTTTTGAATGTTATAGTCGCTCAAGGTACGGCCATCT 2165 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||||||||| || | || | |||||||||||| || | ||||| || || Sbjct 2164 TCAAGTTGTTTGCCTGCGAAGATCAAGCGCTGTTGGTCCGGGGGAATTCCCTCCTTATCC 2105 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | ||| |||| || ||| || | ||||||||| Sbjct 2104 TGAATCTTGCT-CTTTACGTTGTCGATAGTATCGCTGGACTCGACCTCGAGGGTGATGGT 2046 Query 16903 TTTTCCGGT 16911 || ||||| Sbjct 2045 CTTGCCGGT 2037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405013278353650