Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14665 82.4 6e-11
>SEQ14665
Length=6019
Score = 82.4 bits (90), Expect = 6e-11
Identities = 133/189 (70%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| || | ||| || || ||||||||||| ||||| |||||| || ||| | | ||
Sbjct 2224 AGGACGAGATGGAGAGTAGACTCCTTTTGAATGTTATAGTCGCTCAAGGTACGGCCATCT 2165
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||||||||| || | || | |||||||||||| || | ||||| || ||
Sbjct 2164 TCAAGTTGTTTGCCTGCGAAGATCAAGCGCTGTTGGTCCGGGGGAATTCCCTCCTTATCC 2105
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | ||| |||| || ||| || | |||||||||
Sbjct 2104 TGAATCTTGCT-CTTTACGTTGTCGATAGTATCGCTGGACTCGACCTCGAGGGTGATGGT 2046
Query 16903 TTTTCCGGT 16911
|| |||||
Sbjct 2045 CTTGCCGGT 2037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405013278353650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |