Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14127 123 5e-23
>SEQ14127
Length=21342
Score = 123 bits (136), Expect = 5e-23
Identities = 180/252 (71%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562
|||||||||| || || || | |||| |||||||| | ||| ||| |||| || |
Sbjct 14700 TCATCACAGAGGCTGTCGAGATCGAACAGGAATTCTTGACCGAGGCTCTTCCTTGTGCAC 14759
Query 243563 TTATTGGCATGAACTCTGAAC-TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| ||||||||||| | |||| | ||| || |||||||| ||||| ||||| || |
Sbjct 14760 TTCTTGGCATGAACGC-GAACTTGATGAAGCAATACATCGAGTTCGTCGCCGATCGTCTC 14818
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| | || |||||| | ||||| |||||||| || ||||| || | ||| ||||||
Sbjct 14819 CTAGTTGCTCTTGGTAACGAGAAGGTGTACAAGTCTTCCAACCCATTCGACTTCATGGAG 14878
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| || || ||| || || ||||||||||| ||| | || |||| || ||
Sbjct 14879 AACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 14938
Query 243742 CCTGGTGTGATG 243753
||||||| |||
Sbjct 14939 GCTGGTGTTATG 14950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102666132612250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |