Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14673 138 1e-27
SEQ14127 100 3e-16
>SEQ14673
Length=3941
Score = 138 bits (152), Expect = 1e-27
Identities = 871/1381 (63%), Gaps = 36/1381 (3%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
|||||||||| ||| | |||| | | |||||||||||||| || |||||||| |
Sbjct 757 TGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGTCTTGAGAC 816
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
|| ||||| || | |||||| || | | |||| | ||| || || ||||
Sbjct 817 CCAATTTCCAACCAGCGAAATGCATGGAAGTAATCTTGCCCATTGTGGGGTCTTTCATGT 876
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
| |||||| ||| || || || | ||| ||||| || || ||||| | || ||
Sbjct 877 GAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGGTCAGCGGCCATTTGAA-CA 935
Query 113745 CATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802
|| ||| | || | ||||| || || |||| || ||| || ||| |||| ||
Sbjct 936 -ATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGTGCCTTGATGTCAGCTGGAAT 994
Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862
| || ||||| || || ||||| | || || | | |||||| | | |||
Sbjct 995 GTTGGGAATGTTTTGAATAGAACCACCGTCAGCGATGATACGGTTCTTCATGTTGTCTGA 1054
Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 113920
||| | || || | ||||||| | || ||| | | ||||| || ||
Sbjct 1055 CCATAATCCCATGTCGACAAGATCCTTGAGCAGCCATGGGT--TAACAACTTGGAATTCT 1112
Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979
|| || | | || | ||| ||||| || | |||||||| ||||||||||| |||
Sbjct 1113 CCAGCCAAGACACGACG-AGAGTAGATGTTAGAAGTGTATGGTTCAAAGCACTCGTTGAA 1171
Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039
||| | ||||| | |||| |||||| ||||| || || | ||| | ||||| ||||
Sbjct 1172 ACCGAGAATTTGAGAGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACTGTTGCGGAC 1231
Query 114040 ACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GTTG--AGCTTTGTC 114094
||| | || | || || ||| | | |||||||| | || | || | | |
Sbjct 1232 ACCGTGTTGTTTGATTGATTTCTTCAAGCTATCCCAGTCCCAAAGGTCGGTAGGTGTAAC 1291
Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154
||||| ||||||| | || || || | ||| | || || || || | |||
Sbjct 1292 TCCCC-----ACATATCGTATTGAAGTTCGCCCTTCGAGACAGGTGAGCCTTCGTAAGTC 1346
Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 114214
|| || | ||| ||| || | || | || | || ||||| || ||
Sbjct 1347 TCATAGGTACCCAACTCCTTAGCAATCTCAACGGACGATGTCAAAGCAGCGTGGTAAATA 1406
Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC-A 114273
|| || || || || || | |||||| || || ||||| | | ||| |
Sbjct 1407 GTTTCGAAGATTTGAATGTTGAGGTGCTTGGCTTCAGGTGATTCAAATGGTAATCGAAGA 1466
Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333
|| ||| |||| || |||||||| ||||||| | || || ||||| | | |||
Sbjct 1467 GCCAAGAAAG-CATCGGCAAGACCTTGAACACCGACAGCGATAGGTCGATGACGGAAATT 1525
Query 114334 AGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392
||||| || ||| ||||| || | || | || || | | | || | |||
Sbjct 1526 GCTCTTTCTGGCC-TCTGGGACGGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTTC 1584
Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC-TTCA 114451
|| || || | || | || |||||||||| | |||| || | | ||| ||||
Sbjct 1585 TGACAACGACTTGAGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTTCC---CTCATTCA 1641
Query 114452 TTG--ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 114509
| ||| | | || || || || || |||| ||||| || | |||||
Sbjct 1642 TGTCCACAAATGTTGGGAGAGCAATGGAAGCCAAGTTACAGCAAGCGACTTCATCTGGGG 1701
Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569
||| ||| || | |||||| || |||||||| || || ||||||||| | ||||||||
Sbjct 1702 CAGAGTATTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATGGTGCCGAGGTTCTTTT 1761
Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629
| || ||| | || || |||||||||||||||||| |||| | || ||||| ||||
Sbjct 1762 GGTTACTCTTCTTATTGCATGCATCCTTGTAAAGCATGAATGGATTTCCGGTCTCGGTTT 1821
Query 114630 GGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCC 114686
| | || |||||| | | ||| | | |||| | ||| ||| ||| |
Sbjct 1822 GAGCCTCGAGAATGGAGTACCAAAGCTTTTGGGCTTTGA---TGGTCTTGCGACCTCTAC 1878
Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746
| |||| ||| || | ||||| ||||||||||| || || | || | | ||
Sbjct 1879 CTTCCTTCTCATAACTCTCATAGAGAGCTTCAAACTCGTCGCCATATACATCAGCCAACC 1938
Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806
| || | || ||||| | || | ||| | | || ||||||||||||||||
Sbjct 1939 CAGGACATTCATTGGGGCACATTAGTGTCCAATCCGCGTTCTTTTCAACACGCTTCATGA 1998
Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866
|||| || || ||||| | || |||| ||||| || ||| ||||||| | || |
Sbjct 1999 AGAGATCCGGAATCCACAAGGCATAGAAAAGATCACGGGCGCGGACTTCTTCCTTGCCAT 2058
Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 114926
| || || | |||| || || | | ||| |||||||| || || || || || |
Sbjct 2059 GGTTCTTTCGGAGGTCCAGGAACTCGAAAACATCTGCGTGCCAAGGCTCAAGATAGACTG 2118
Query 114927 C 114927
|
Sbjct 2119 C 2119
>SEQ14127
Length=21342
Score = 100 bits (110), Expect = 3e-16
Identities = 111/148 (75%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118
|||||||| || |||||||||||||| ||||| ||||| || || | ||| | ||
Sbjct 14631 TGGAGACCTTCATCACGGGAGATGAGCTCATTGGAGAAAGTGAGACCAGCCATCAAGCCA 14572
Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178
|||||||| | |||||| || | | ||||| || ||||||||| ||||| |||
Sbjct 14571 CGCTTCTTGAGCCAGAAGATAGAAGCGAATGATCCACTGAAGAAGATGCCCTCAACAGCA 14512
Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGG 126206
|| || |||| ||||||| ||||||||
Sbjct 14511 GCAAAAGCAACCAGACGCTGAGCAAAGG 14484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597240588165800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |