Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08- 07] 15,135 sequences; 48,719,559 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value SEQ14673 138 1e-27 SEQ14127 100 3e-16 >SEQ14673 Length=3941 Score = 138 bits (152), Expect = 1e-27 Identities = 871/1381 (63%), Gaps = 36/1381 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| ||| | |||| | | |||||||||||||| || |||||||| | Sbjct 757 TGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGTCTTGAGAC 816 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 || ||||| || | |||||| || | | |||| | ||| || || |||| Sbjct 817 CCAATTTCCAACCAGCGAAATGCATGGAAGTAATCTTGCCCATTGTGGGGTCTTTCATGT 876 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 | |||||| ||| || || || | ||| ||||| || || ||||| | || || Sbjct 877 GAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGGTCAGCGGCCATTTGAA-CA 935 Query 113745 CATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802 || ||| | || | ||||| || || |||| || ||| || ||| |||| || Sbjct 936 -ATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGTGCCTTGATGTCAGCTGGAAT 994 Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862 | || ||||| || || ||||| | || || | | |||||| | | ||| Sbjct 995 GTTGGGAATGTTTTGAATAGAACCACCGTCAGCGATGATACGGTTCTTCATGTTGTCTGA 1054 Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 113920 ||| | || || | ||||||| | || ||| | | ||||| || || Sbjct 1055 CCATAATCCCATGTCGACAAGATCCTTGAGCAGCCATGGGT--TAACAACTTGGAATTCT 1112 Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || || | | || | ||| ||||| || | |||||||| ||||||||||| ||| Sbjct 1113 CCAGCCAAGACACGACG-AGAGTAGATGTTAGAAGTGTATGGTTCAAAGCACTCGTTGAA 1171 Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039 ||| | ||||| | |||| |||||| ||||| || || | ||| | ||||| |||| Sbjct 1172 ACCGAGAATTTGAGAGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACTGTTGCGGAC 1231 Query 114040 ACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GTTG--AGCTTTGTC 114094 ||| | || | || || ||| | | |||||||| | || | || | | | Sbjct 1232 ACCGTGTTGTTTGATTGATTTCTTCAAGCTATCCCAGTCCCAAAGGTCGGTAGGTGTAAC 1291 Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154 ||||| ||||||| | || || || | ||| | || || || || | ||| Sbjct 1292 TCCCC-----ACATATCGTATTGAAGTTCGCCCTTCGAGACAGGTGAGCCTTCGTAAGTC 1346 Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 114214 || || | ||| ||| || | || | || | || ||||| || || Sbjct 1347 TCATAGGTACCCAACTCCTTAGCAATCTCAACGGACGATGTCAAAGCAGCGTGGTAAATA 1406 Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC-A 114273 || || || || || || | |||||| || || ||||| | | ||| | Sbjct 1407 GTTTCGAAGATTTGAATGTTGAGGTGCTTGGCTTCAGGTGATTCAAATGGTAATCGAAGA 1466 Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333 || ||| |||| || |||||||| ||||||| | || || ||||| | | ||| Sbjct 1467 GCCAAGAAAG-CATCGGCAAGACCTTGAACACCGACAGCGATAGGTCGATGACGGAAATT 1525 Query 114334 AGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392 ||||| || ||| ||||| || | || | || || | | | || | ||| Sbjct 1526 GCTCTTTCTGGCC-TCTGGGACGGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTTC 1584 Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC-TTCA 114451 || || || | || | || |||||||||| | |||| || | | ||| |||| Sbjct 1585 TGACAACGACTTGAGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTTCC---CTCATTCA 1641 Query 114452 TTG--ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 114509 | ||| | | || || || || || |||| ||||| || | ||||| Sbjct 1642 TGTCCACAAATGTTGGGAGAGCAATGGAAGCCAAGTTACAGCAAGCGACTTCATCTGGGG 1701 Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 ||| ||| || | |||||| || |||||||| || || ||||||||| | |||||||| Sbjct 1702 CAGAGTATTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATGGTGCCGAGGTTCTTTT 1761 Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629 | || ||| | || || |||||||||||||||||| |||| | || ||||| |||| Sbjct 1762 GGTTACTCTTCTTATTGCATGCATCCTTGTAAAGCATGAATGGATTTCCGGTCTCGGTTT 1821 Query 114630 GGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCC 114686 | | || |||||| | | ||| | | |||| | ||| ||| ||| | Sbjct 1822 GAGCCTCGAGAATGGAGTACCAAAGCTTTTGGGCTTTGA---TGGTCTTGCGACCTCTAC 1878 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746 | |||| ||| || | ||||| ||||||||||| || || | || | | || Sbjct 1879 CTTCCTTCTCATAACTCTCATAGAGAGCTTCAAACTCGTCGCCATATACATCAGCCAACC 1938 Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806 | || | || ||||| | || | ||| | | || |||||||||||||||| Sbjct 1939 CAGGACATTCATTGGGGCACATTAGTGTCCAATCCGCGTTCTTTTCAACACGCTTCATGA 1998 Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866 |||| || || ||||| | || |||| ||||| || ||| ||||||| | || | Sbjct 1999 AGAGATCCGGAATCCACAAGGCATAGAAAAGATCACGGGCGCGGACTTCTTCCTTGCCAT 2058 Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 114926 | || || | |||| || || | | ||| |||||||| || || || || || | Sbjct 2059 GGTTCTTTCGGAGGTCCAGGAACTCGAAAACATCTGCGTGCCAAGGCTCAAGATAGACTG 2118 Query 114927 C 114927 | Sbjct 2119 C 2119 >SEQ14127 Length=21342 Score = 100 bits (110), Expect = 3e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 |||||||| || |||||||||||||| ||||| ||||| || || | ||| | || Sbjct 14631 TGGAGACCTTCATCACGGGAGATGAGCTCATTGGAGAAAGTGAGACCAGCCATCAAGCCA 14572 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 |||||||| | |||||| || | | ||||| || ||||||||| ||||| ||| Sbjct 14571 CGCTTCTTGAGCCAGAAGATAGAAGCGAATGATCCACTGAAGAAGATGCCCTCAACAGCA 14512 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || || |||| ||||||| |||||||| Sbjct 14511 GCAAAAGCAACCAGACGCTGAGCAAAGG 14484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597240588165800