Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14127 96.9 6e-15
SEQ14673 93.3 7e-14
>SEQ14127
Length=21342
Score = 96.9 bits (106), Expect = 6e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|| ||||||||||| |||||| || || || || || || ||||||| ||| |||||
Sbjct 14655 AAGAGGAGGCACGCGAAGTCGGTATGGAGACCTTCATCACGGGAGATGAGCTCATTGGAG 14596
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033
| |||| || | ||| | |||||| |||||||| || || | || || | ||
Sbjct 14595 AAAGTGAGACCAGCCATCAAGCCACGCTTCTTGAGCCAGAAGATAGAAGCGAATGATCCA 14536
Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093
|| || ||||| ||||| || || ||||| || || || | || | |||| | | |||
Sbjct 14535 CTGAAGAAGATGCCCTCAACAGCAGCAAAAGCAACCAGACGCTGAGCAAAGGTAGAGTTT 14476
Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131
|||| || |||| || ||||| || || |||||
Sbjct 14475 TTGTCTTGAATCCATCTGACAGCCCAGTCGGCTTTCTT 14438
>SEQ14673
Length=3941
Score = 93.3 bits (102), Expect = 7e-14
Identities = 196/288 (68%), Gaps = 6/288 (2%)
Strand=Plus/Plus
Query 205108 CAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTC--TTTCACC-CT 205164
|| ||| ||||||| ||||| ||||| || | ||| ||| | ||| ||||| | |
Sbjct 1934 CAACCCAGGACATTCATTGGGGCACATTAGTGTCCA-ATCCG--CGTTCTTTTCAACACG 1990
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|| ||| || || || ||||||| | | || || ||||||||||| | | | | ||
Sbjct 1991 CTTCATGAAGAGATCCGGAATCCACAAGGCATAGAAAAGATCACGGGCGCGGACTTCTTC 2050
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284
| ||| |||||||| | |||||| | | || || |||||||| ||||| |
Sbjct 2051 CTTGCCATGGTTCTTTCGGAGGTCCAGGAACTCGAAAACATCTGCGTGCCAAGGCTCAAG 2110
Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344
| || || | ||| || || | |||||| ||||| ||||| || | || |
Sbjct 2111 ATAGACTGCAAATGCACCAGGACGCTTGTTTCCACCTTGGTCGACGTATCTAGCAGTGTT 2170
Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392
|||||||||||| ||||| || || | ||||||| | | ||||| ||
Sbjct 2171 GTTGAAAACTCGTAGCATGGGTACGATGCCGTTGGAGTTACCGTTGGT 2218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795004766575600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |