Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq7711 111 2e-19
>seq7711
Length=2071
Score = 111 bits (122), Expect = 2e-19
Identities = 167/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241
||||||||| || || || || || ||||| || ||||||||||||||||||||||| ||
Sbjct 1600 TACACCAATTGGTCCAACACCTGGTCCTCCGCCACCATGTGGAATACAGAATGTCTTGTG 1659
Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301
| || |||||||| ||||| |||||| |||| || | || | || ||
Sbjct 1660 AAGGTTGAGATGACAGACATCAGCACCAATCTCACCAGGCGAACACAACCCAATTTGAGC 1719
Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361
||| | ||| ||||| || | || || ||||| || | | |||||| || | ||| |
Sbjct 1720 ATTCATATTGGCACCGTCCATGTAGACTTGACCGCCGTGCTGATGAACAATATCACA-AG 1778
Query 138362 CTGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415
| | | | || | || ||| |||||||| || ||| ||||||||||||||
Sbjct 1779 CAGCCTTAATCTCTGGTTCGAATACACCGAATGTACTTGGGTATGTAATCATAAT 1833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578888860740200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |