Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14749 111 2e-18
seq8535 87.8 3e-11
>SEQ14749
Length=4074
Score = 111 bits (122), Expect = 2e-18
Identities = 90/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| |||||||||||||| ||||| | |||||||| | || ||||||||||| |||||
Sbjct 2359 GCTGCCAACTACCTCGATATCAAAGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCCAAT 2418
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| || || || ||||| ||||| ||||||||||
Sbjct 2419 ATGATCAAGGGCAAGTCCCCAGAAGAAATCCGAAAGACATTTAACATCA 2467
>seq8535
Length=2522
Score = 87.8 bits (96), Expect = 3e-11
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
||||||||| | || || || || |||||||||||||||||| || |||||||| |
Sbjct 1366 CTCTTTGAGCTTATTCTGGCTGCTAACTACCTCGACATCAAGGGTCTTCTCGATTTTAGC 1307
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
|||| | || ||| | | ||||| |||||| | || || || ||||| ||||| ||
Sbjct 1306 TGCACGGTTGTTGCCTATATGATCAAAGGCAAGACTCCAGAAGAAATCCGAAAGACATTC 1247
Query 2035749 AACATC 2035754
||||||
Sbjct 1246 AACATC 1241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7914636421019265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |