Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08- 07] 15,135 sequences; 48,719,559 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value SEQ14665 129 5e-25 >SEQ14665 Length=6019 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| ||||| |||||||||||||| ||||| || || | ||||||| | Sbjct 2511 CGGAGCACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCGCTCAGGGTGCGACCA 2452 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||||||||| ||||| | ||||| | ||| |||||||| ||||| ||||| ||| Sbjct 2451 TCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGTTGATCCGGAGGAATGCCCTCCTTG 2392 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | ||||| || || || || ||||| || Sbjct 2391 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATG 2332 Query 29752 GTTTTGCCAGT 29762 || |||||||| Sbjct 2331 GTCTTGCCAGT 2321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385148143309035