Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14665 156 8e-33
>SEQ14665
Length=6019
Score = 156 bits (172), Expect = 8e-33
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||||| ||| || ||||| || || |||||||| ||| |||| ||
Sbjct 2897 ACGAAGCACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTTCTGCC 2838
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || | || |||||||||||||| | || ||||| || || || || || |||||
Sbjct 2837 ATCCTCCAACTGCTTTCCAGCAAAGATCAATCGCTGTTGGTCCGGTGGGATACCCTCCTT 2778
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||||| || ||||| ||||| ||||| | ||| |||||||| || ||
Sbjct 2777 GTCTTGAATCTTTGACTTGACATTGTCAATGGTATCTGACGATTCCACTTCCAATGTAAT 2718
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| || || ||||||||
Sbjct 2717 GGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 2682
Score = 98.7 bits (108), Expect = 2e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || || ||||| || || |||||||| || || || || |
Sbjct 2682 TACCACCACGGAGACGAAGGACCAAATGCAGTGTGGACTCTTTCTGGATGTTGTAGTCTG 2623
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||||| | | ||| || || ||||| || ||||||||||| || | ||| || || || |
Sbjct 2622 ATAGAGTGCGACCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCCGGTG 2563
Query 82702 GTATTCCTTCCTTATCTTGAAT 82723
| || || ||||||||||||||
Sbjct 2562 GGATACCCTCCTTATCTTGAAT 2541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981636806830765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |