Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14673 215 6e-51
SEQ14127 129 7e-25
>SEQ14673
Length=3941
Score = 215 bits (238), Expect = 6e-51
Identities = 1118/1751 (64%), Gaps = 57/1751 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
||||| | ||| ||||||| || ||| | |||||||| || || || ||||| | |
Sbjct 2512 CCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGACGATATTGAGAGCGCC 2453
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || |||||| | | || |||| ||||| | || || || ||
Sbjct 2452 ATTGAGACCTACAACCTTATGTCCAACAAATAC-TTCACACACGCCTCCCCTACACTTTT 2394
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
| |||||||||||| | | || | || |||||||| || | | ||||||||
Sbjct 2393 CTCCGCTGGTACACCACAAGCTCAGCTTTCATCATGCTTCCTCATTGATATGAAGGAGGA 2334
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | ||||| |||| || || | | ||||| ||||| || |||||
Sbjct 2333 CAGTATTGATGGTATTTATGATACCCTCAAGACATGTGCTATGATCTCTAAAAATGCTGG 2274
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|||||||| | |||| || | | |||| | | || || || ||
Sbjct 2273 AGGTATTGGTCTCAACATTCACAGAATCCGTGCCACTGGTGCATACATCGCCGGTACCAA 2214
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| | || | || || | || ||||| || || || ||| ||| || | || ||
Sbjct 2213 CGGTAACTCCAACGGCATCGTACCCATGCTACGAGTTTTCAACAACACTGCTAGATACGT 2154
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| |||| ||| ||||| | || | ||||||||||||||||| |||||
Sbjct 2153 CGACCAAGGTGGAAACAAGCGTCCTGGTGCATTT---GCAGTCTATCTTGAGCCTTGGCA 2097
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
||| ||| | | |||||||| || | || ||||| || | || || | ||
Sbjct 2096 CGCAGATGTTTTCGAGTTCCTGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTCCGCGC 2037
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
||| ||||| |||| || | |||||||| ||||||||||||||| | ||||| |||
Sbjct 2036 CCGTGATCTTTTCTATGCCTTGTGGATTCCGGATCTCTTCATGAAGCGTGTTGAAAAGAA 1977
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCA---CCTGGTCTCTCCGATGCCGTGGG 104811
| ||||| | || | || || ||| | | ||||| | | |||| ||
Sbjct 1976 CGCGGATTGGACACTAATGTGCCC---CAATGAATGTCCTGGGTTGGCTGATGTATATGG 1920
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACG 104869
|| ||||||||||| || || | || ||| | |||||| | | | | || |||
Sbjct 1919 CGACGAGTTTGAAGCTCTCTATGAGAGTTATGAGAAGGAAGGTAGAG-GTC-GCAAGACC 1862
Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| ||| | | ||| | | |||||| || ||||||||||||| || | |||
Sbjct 1861 ATCAAAGCCCAAAAGCTTTGGTACTCCATTCTCGAGGCTCAAACCGAGACCGGAAATCCA 1802
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
| |||||||||||| || || || || | |||||||| |||||||| | || ||
Sbjct 1801 TTCATGCTTTACAAGGATGCATGCAATAAGAAGAGTAACCAAAAGAACCTCGGCACCATT 1742
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
|| |||||| | || |||||||| | |||| | | | |||||| |||
Sbjct 1741 CGCAGCTCCAATTTGTGCACAGAAATTGTCGAATACTCTGCCCCAGATGAAGTCGCTTGC 1682
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTGA 105108
|||||| | || || || |||||||| | | |||||| | || | | || | ||
Sbjct 1681 TGTAACTTGGCTTCCATTGCTCTCCCAACATTTGTGGA-CATGAATGAGGGAACTTACGA 1623
Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168
|| |||| || ||||| ||||| || || || |||| | |||| | |||||
Sbjct 1622 TTTCCAAAAGCTTCACGAGGTTACTCAAGTCGTTGTCAGAAACTTGAACAAGATCATTGA 1563
Query 105169 TAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
| || | |||||||| ||| || | || ||| | | || || || || |
Sbjct 1562 CATCAACTACTACCCCGTCCCAGA-GGCCAGAAAGAGCAATTTCCGTCATCGACCTATCG 1504
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 105287
| |||||||||| ||||| || |||| ||| | | ||| ||||||| ||
Sbjct 1503 CTGTCGGTGTTCAAGGTCTTGCCGATGCTTTCTTGGCTCTTCGATTACCATTTGAATCAC 1444
Query 105288 ACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-- 105345
||||| ||| | |||| | || || || || || || ||||| ||| ||||
Sbjct 1443 CTGAAGCCAAGCACCTCAACATTCAAATCTTCGAAACTATTTACCACGCTGCT-TTGACA 1385
Query 105346 -GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404
| ||| ||| | || |||| ||| | ||||| || | || || || || |
Sbjct 1384 TCGTCCGTTGAGATTGCTAAGGAGTTG--GGTACCTATGAGACTTACGAAGGCTCACCTG 1327
Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGAC 105463
|| | || | ||||||| |||||||||| | || | ||| | | | | |||
Sbjct 1326 TCTCGAAGGGCGAACTTCAATACGATATGTGGGGA-GTTACACCTACCGACCTTTGGGAC 1268
Query 105464 TGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522
||||| |||| | ||| || ||||| | | ||| | || |||||| | ||| | ||
Sbjct 1267 TGGGATAGCT-TGAAGAAATCAATCAAACAACACGGTGTCCGCAACAGTTTGCTCGTTGC 1209
Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582
||| |||||||||||| |||| | ||||| | ||| || || ||||||||||| ||
Sbjct 1208 TCCTATGCCAACAGCCAGCACCTCTCAAATTCTCGGTTTCAACGAGTGCTTTGAACCATA 1149
Query 105583 CACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 105641
||| | |||||||| ||| | | | | || ||||| || |||| ||| |
Sbjct 1148 CACTTCTAACATCTACTCT-CGTCGTGTCTTGGCTGGAGAATTCCAAGTTGTTAAC--CC 1092
Query 105642 AT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCT 105696
|| || | | || || || || || | ||||| | | |||||| | | |
Sbjct 1091 ATGGCTGCTCAAGGATCTTGTCGACATGGGATTATGGTCAGACAACATGAAGAACCGTAT 1032
Query 105697 CAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755
||| | ||| |||||||| |||||||| ||| | |||||| ||| || |||
Sbjct 1031 CATCGCTGA----CGGTGGTTCTATTCAAAACATTCCCAACATTCCAGCTGACATCAAGG 976
Query 105756 AGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAGA 105813
| ||| || || ||||| | || | ||| | | || | |||||||| ||
Sbjct 975 CACTTTACAAGACCGTCTGGGAGATTTCTCAACGAACAA--TTGTTCAAATGGCCGCTGA 918
Query 105814 TCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACG 105871
|||||| ||| |||| | ||||| | | ||||| | |||| || || ||
Sbjct 917 CCGTGGTGCCTTTGTTGACC--AGTCACAATCAATGAACATTCACATGAAAGACCCCACA 860
Query 105872 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 105931
||| |||| | |||| ||||| | ||||||| ||||||||| || || |||
Sbjct 859 ATGGGCAAGATTACTTCCATGCATTTCGCTGGTTGGAAATTGGGTCTCAAGACCGGAATG 800
Query 105932 TATTACCTCCG 105942
|| ||||||||
Sbjct 799 TACTACCTCCG 789
>SEQ14127
Length=21342
Score = 129 bits (142), Expect = 7e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTC 94790
|||||||| || ||| | |||||||| || |||||| | | ||| || | ||||| |
Sbjct 14420 ACAGTTCCTTGCATTAAGAAGAAAGCCGACTGGGCTGTCAGATGGATTCAAGACAAAAAC 14479
Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850
| | |||||||| |||| || | || ||||| ||||||||| ||||||||| |||
Sbjct 14480 TC-TACCTTTGCTCAGCGTCTGGTTGCTTTTGCTGCTGTTGAGGGCATCTTCTTCAGTGG 14538
Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
|| ||| |||| | |||||||||||||| || | ||| | |||||| |||||
Sbjct 14539 ATCATTCGCTTCTATCTTCTGGCTCAAGAAGCGTGGCTTGATGGCTGGTCTCACTTTCTC 14598
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCA 94943
||| ||||| ||||| ||||| || || |||||
Sbjct 14599 CAATGAGCTCATCTCCCGTGATGAAGGTCTCCA 14631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583150454347400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |