Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq485 163 6e-35
>seq485
Length=41282
Score = 163 bits (180), Expect = 6e-35
Identities = 191/253 (75%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC- 230445
|||| || || || ||||| | ||| | |||||| | ||| ||| ||||||| |||
Sbjct 7214 TCATCACCGAGGCTGTTGAGATTGAACAAGAGTTCTTGACTGAGGCTCTTCCATG-CGCG 7272
Query 230446 CTTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| ||||||||||| | |||||| ||| || |||||||| ||||| || ||||| |
Sbjct 7273 CTTCTTGGCATGAACTC-GAACTTGATGAAGCAATACATCGAGTTCGTCGCAGACCGTCT 7331
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| ||||| |||||| |||| || |||||||| ||| |||||||| | || |||||
Sbjct 7332 CCTCGTTGCTCTTGGTAACGACAAGGTGTACAAATCTGCCAACCCCTTCGACTTCATGGA 7391
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| ||| || || ||| ||||| ||||||||||| ||| | ||| ||||||| ||||
Sbjct 7392 GAACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTCGGTGACTACCAGAA 7451
Query 230625 GCCTGGTGTGATG 230637
| ||||||| |||
Sbjct 7452 GGCTGGTGTTATG 7464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057771480691250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |