Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq485 163 6e-35 >seq485 Length=41282 Score = 163 bits (180), Expect = 6e-35 Identities = 191/253 (75%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC- 230445 |||| || || || ||||| | ||| | |||||| | ||| ||| ||||||| ||| Sbjct 7214 TCATCACCGAGGCTGTTGAGATTGAACAAGAGTTCTTGACTGAGGCTCTTCCATG-CGCG 7272 Query 230446 CTTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| ||||||||||| | |||||| ||| || |||||||| ||||| || ||||| | Sbjct 7273 CTTCTTGGCATGAACTC-GAACTTGATGAAGCAATACATCGAGTTCGTCGCAGACCGTCT 7331 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | ||||| |||||| |||| || |||||||| ||| |||||||| | || ||||| Sbjct 7332 CCTCGTTGCTCTTGGTAACGACAAGGTGTACAAATCTGCCAACCCCTTCGACTTCATGGA 7391 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||| || || ||| ||||| ||||||||||| ||| | ||| ||||||| |||| Sbjct 7392 GAACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTCGGTGACTACCAGAA 7451 Query 230625 GCCTGGTGTGATG 230637 | ||||||| ||| Sbjct 7452 GGCTGGTGTTATG 7464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057771480691250