Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1590 89.7 4e-13
>seq1590
Length=53781
Score = 89.7 bits (98), Expect = 4e-13
Identities = 125/171 (73%), Gaps = 6/171 (4%)
Strand=Plus/Minus
Query 101680 AAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAA-ACTCTC 101738
||||||||||| ||||| | ||||| || |||||||| ||| ||| ||| |||| |
Sbjct 23970 AAGAGCATCAACATGATCCAGATAGACATGCGCATCTCCCATAACATGCGTAAGACTC-C 23912
Query 101739 CAGGCACTAGATTAGTGACATGAGCAATC--ATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796
|||| | |||| | |||||||| ||| ||| || | || | |||||| || ||
Sbjct 23911 CAGGAATCAGATCACAAACATGAGCGATCATATGGCAG--AGGAGCGCATAGCTGGCGAT 23854
Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACA 101847
||| ||||| || || | |||||||||| |||| ||||| | ||||||
Sbjct 23853 GTTGAATGGTACGCCAAGCCCCATATCACACGATCGCTGATATAATTGACA 23803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361234139347625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |