Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq485 147 4e-30
>seq485
Length=41282
Score = 147 bits (162), Expect = 4e-30
Identities = 168/225 (75%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907
||| |||||||||| | |||||| | | ||||| ||| ||| ||| | || ||
Sbjct 6945 CATTAAGAAGAAGGCTGACTGGGCTGTCAGATGGATTCAAGACAAAAACTCTACCTTCGC 7004
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||| | ||||| |||||||| ||||||||||| ||||| ||||| ||||||| ||
Sbjct 7005 TCAACGCCTAGTTGCTTTTGCTGCTGTTGAAGGAATTTTCTTCAGTGGATCATTCGCCTC 7064
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| |||||| ||||||| | || | || |||||||||| | |||||||||| ||||
Sbjct 7065 TATCTTCTGGCTCAAGAAACGTGGCTTGATGGCTGGTCTCACTTTCTCCAATGAGCTCAT 7124
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| | |||||||||||||| |||||| |||||| | || ||
Sbjct 7125 CTCCCGTGACGAAGGTCTTCACACCGACTTCGCATGCCTCCTTTT 7169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989534868700625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |