Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq438 96.9 3e-15 >seq438 Length=27325 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 || |||||| | || |||||| ||| || || |||||||||| ||| ||| ||||| Sbjct 208 CAACTGCGCCACACGATCGCCCTCCTTCACTTCAAAATCGTTGTCTCCGTGGTTAAACAG 149 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | ||| ||| | || || || || || || ||||||||||||||| |||||| | Sbjct 148 TAACACCTTCACCTGCCCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCAT 89 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 || ||| || || ||||||||||| || | |||||||| Sbjct 88 ATGTTTGGATGCGAGCCCGGAGCGGGGTGCTATGCGGCCGT 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430034090009000