Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq438 96.9 3e-15
>seq438
Length=27325
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652
|| |||||| | || |||||| ||| || || |||||||||| ||| ||| |||||
Sbjct 208 CAACTGCGCCACACGATCGCCCTCCTTCACTTCAAAATCGTTGTCTCCGTGGTTAAACAG 149
Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712
| ||| ||| | || || || || || || ||||||||||||||| |||||| |
Sbjct 148 TAACACCTTCACCTGCCCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCAT 89
Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
|| ||| || || ||||||||||| || | ||||||||
Sbjct 88 ATGTTTGGATGCGAGCCCGGAGCGGGGTGCTATGCGGCCGT 48
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430034090009000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |