Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq123 113 7e-21
seq523 109 9e-20
>seq123
Length=24842
Score = 113 bits (124), Expect = 7e-21
Identities = 86/99 (87%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||||||| |||| |||||| || ||||||||||| ||||| ||||| |||||
Sbjct 21373 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACAAAGCCTGCTAT 21431
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| |||||||||||||| ||||||||| ||||
Sbjct 21432 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 21470
>seq523
Length=22575
Score = 109 bits (120), Expect = 9e-20
Identities = 82/94 (87%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | |||| ||||||||||| |||||||||||||||||
Sbjct 1985 GCCAAGCGTCACCGCAAGATCT-TGAGAGACAACATCCAAGGTATCACCAAGCCAGCTAT 1927
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
| | ||||| |||||||||||||| |||||||||
Sbjct 1926 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 1893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071657060375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |