Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq123 113 7e-21 seq523 109 9e-20 >seq123 Length=24842 Score = 113 bits (124), Expect = 7e-21 Identities = 86/99 (87%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||||||| |||| |||||| || ||||||||||| ||||| ||||| ||||| Sbjct 21373 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACAAAGCCTGCTAT 21431 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 | | ||||| |||||||||||||| ||||||||| |||| Sbjct 21432 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 21470 >seq523 Length=22575 Score = 109 bits (120), Expect = 9e-20 Identities = 82/94 (87%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | |||| ||||||||||| ||||||||||||||||| Sbjct 1985 GCCAAGCGTCACCGCAAGATCT-TGAGAGACAACATCCAAGGTATCACCAAGCCAGCTAT 1927 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 | | ||||| |||||||||||||| ||||||||| Sbjct 1926 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 1893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071657060375