Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3721 87.8 2e-12 >seq3721 Length=43933 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||| |||||||| | ||||| ||||| || || || ||||| ||||| || || Sbjct 40410 CGATACCATCGACAATGTCAAGTCTAAGATCCAAGATAAGGAGGGCATTCCTCCGGACCA 40469 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | ||||||| || ||| || ||||||||||| | | ||| | || ||| || || Sbjct 40470 GCAACGTCTGATTTTCGCCGGTAAACAACTCGAAGACGGCCGAACCCTCTCCGACTACAA 40529 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||| ||||| |||||||| |||| || ||| Sbjct 40530 CATCCAAAAGGAATCTACTCTTCACTTGGTG 40560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429915695600625