Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq68 174 2e-38
>seq68
Length=8748
Score = 174 bits (192), Expect = 2e-38
Identities = 270/386 (70%), Gaps = 0/386 (0%)
Strand=Plus/Minus
Query 93979 GGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGG 94038
|| |||| ||| | ||||||| ||||| | || || ||| |||| || || |||||
Sbjct 3949 GGTATTTACGATACCCTCAAGACGTGTGCTATGATTTCCAAAAACGCCGGTGGCATCGGT 3890
Query 94039 ATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCC 94098
||| | ||| | ||||| | ||| ||||||| |||||||||||| | ||||
Sbjct 3889 CTCAACATTCACAGAATCCGTGCTACTGGTGCCTACATTGCCGGTACCAATGGTAACTCC 3830
Query 94099 AACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGT 94158
|| || | || |||||||| || || |||||||| | ||| | || || |||||||||
Sbjct 3829 AATGGTATTGTGCCTATGCTACGAGTTTTCAACAATACTGCGAGATATGTTGACCAGGGT 3770
Query 94159 GGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAG 94218
|| | | | ||| | || || |||| || ||||| |||||||| |||||
Sbjct 3769 GGAAACAAGCGTCCTGGTGCATTTGCAATCTACCTTGAGCCTTGGCACGCAGACGTTTTC 3710
Query 94219 GCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTC 94278
| || | ||||| |||||||||||||| || || | | ||| | || ||||||
Sbjct 3709 GAGTTTCTGGACCTCCGAAAGAACCACGGTAAGGAAGAAGTCCGCGCCCGTGATCTCTTC 3650
Query 94279 TACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGT 94338
|||||| | ||| | || || || |||||||| || ||||| || ||| | |||||
Sbjct 3649 TACGCTTTGTGGATTCCGGATCTCTTTATGAAGCGTGTCGAAAAGAACGGAGACTGGACA 3590
Query 94339 CTTTTTTGTCCCAATGAATGTCCCGG 94364
|| | |||||||| ||||| || ||
Sbjct 3589 CTGATGTGTCCCAACGAATGCCCTGG 3564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494699236845000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |