Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq2887 87.8 7e-12
>seq2887
Length=18503
Score = 87.8 bits (96), Expect = 7e-12
Identities = 120/163 (74%), Gaps = 5/163 (3%)
Strand=Plus/Plus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| || || | || |||||||||||||||||||| || | |||||||||| || ||
Sbjct 9932 CTCGATTAAATGTGCAATAGTCATACGAGAAGGAATAGCGTGCGGGTTGATGATAAGATC 9991
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802
||| || | | ||| | | |||| ||||| |||| || || || | | ||| |
Sbjct 9992 AGG-AACAATGCCTTGACTAG--TGAATGGCATGTCTTGTTGCATATA-TGTGATACCGA 10047
Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
|||| |||||||| |||| | ||||||||||||||||| ||
Sbjct 10048 TAGTACCCTTTTGTCCGTGACGAGAAGCAAACTTGTCACCGAT 10090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951877487521000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |