Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq2887 87.8 7e-12 >seq2887 Length=18503 Score = 87.8 bits (96), Expect = 7e-12 Identities = 120/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| || || | || |||||||||||||||||||| || | |||||||||| || || Sbjct 9932 CTCGATTAAATGTGCAATAGTCATACGAGAAGGAATAGCGTGCGGGTTGATGATAAGATC 9991 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 ||| || | | ||| | | |||| ||||| |||| || || || | | ||| | Sbjct 9992 AGG-AACAATGCCTTGACTAG--TGAATGGCATGTCTTGTTGCATATA-TGTGATACCGA 10047 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| |||||||| |||| | ||||||||||||||||| || Sbjct 10048 TAGTACCCTTTTGTCCGTGACGAGAAGCAAACTTGTCACCGAT 10090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951877487521000