Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3721 89.7 5e-13 >seq3721 Length=43933 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| || || || ||||| |||| || || |||| ||| || |||||||||| Sbjct 40262 GTAGACTCCTTTTGGATGTTGTAGTCGCTCAAGGT--ACGACCGTCTTCAAGCTGCTTGC 40205 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||| ||||| || || || || ||||| || |||||| || Sbjct 40204 CTGCGAAGATCAAGCGCTGTTGGTCCGGGGGAATTCCCTCCTTATCCTGGATCTTGCTCT 40145 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | || | |||||| ||| ||| || |||| |||| ||| |||||||| Sbjct 40144 TGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 40090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483397384305000