Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3721 89.7 5e-13
>seq3721
Length=43933
Score = 89.7 bits (98), Expect = 5e-13
Identities = 126/175 (72%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|| ||||| || || || ||||| |||| || || |||| ||| || ||||||||||
Sbjct 40262 GTAGACTCCTTTTGGATGTTGTAGTCGCTCAAGGT--ACGACCGTCTTCAAGCTGCTTGC 40205
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | ||||| ||||| || || || || ||||| || |||||| ||
Sbjct 40204 CTGCGAAGATCAAGCGCTGTTGGTCCGGGGGAATTCCCTCCTTATCCTGGATCTTGCTCT 40145
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | || | |||||| ||| ||| || |||| |||| ||| ||||||||
Sbjct 40144 TGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 40090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483397384305000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |