Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq485 105 2e-17
>seq485
Length=41282
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846
||||| ||||| ||||| || || |||||| | | |||||||||||| | | |||
Sbjct 6938 TTCCTTGCATTAAGAAGAAGGCTGACTGGGCTGTCAGATGGATTCAAGACAAAAACTCTA 6997
Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906
|| || | | || || ||||||||| ||||||||| || ||||| || | |
Sbjct 6998 CCTTCGCTCAACGCCTAGTTGCTTTTGCTGCTGTTGAAGGAATTTTCTTCAGTGGATCAT 7057
Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966
|| ||||||| ||||| ||||| ||||| |||||| |||| ||| | || ||||||
Sbjct 7058 TCGCCTCTATCTTCTGGCTCAAGAAACGTGGCTTGATGGCTGGTCTCACTTTCTCCAATG 7117
Query 131967 AATTCATCTCGAGAGATGAAG 131987
| ||||||| | || ||||
Sbjct 7118 AGCTCATCTCCCGTGACGAAG 7138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186753876598875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |