Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08- 07] 1,637 sequences; 39,468,807 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq845 154 3e-32 >seq845 Length=273148 Score = 154 bits (170), Expect = 3e-32 Identities = 187/252 (74%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 |||| ||||| || ||||| | |||| | || ||| | || ||| |||| ||| | Sbjct 251573 TCATCACAGAGGCTGTTGAGATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGTGCAC 251514 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || ||||||||||||| |||||| ||| || |||||||| ||||| ||||| || | Sbjct 251513 TTCTTGGCATGAACGC-GAACTTGATGAAGCAATACATCGAGTTCGTCGCCGATCGTCTC 251455 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || |||||| ||||||| |||||||| ||| ||||| || | || |||||| Sbjct 251454 CTAGTCGCTCTTGGTAACGAGAAGGTGTACAAGTCTGCCAACCCATTCGACTTCATGGAG 251395 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || ||| ||||| ||||||||||| ||| | || ||||||| |||| | Sbjct 251394 AACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 251335 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 251334 GCTGGTGTTATG 251323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057801813133310