Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08-
07] 1,637 sequences; 39,468,807 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq586 269 3e-67
seq845 98.7 1e-15
>seq586
Length=108090
Score = 269 bits (298), Expect = 3e-67
Identities = 1144/1780 (64%), Gaps = 43/1780 (2%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||| ||||| || |||||||||| | ||||| || ||||||||||| || || |||
Sbjct 12326 GTGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGTCTTGAGA 12385
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| | |||| ||| |||||||| || | ||| | || ||| ||
Sbjct 12386 CCCAATTTCCAACCGGCGAAATGCATGGAAGTAATCTTGCCCATTGTGGGGTCTTTCATG 12445
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
|| || ||||| ||||| || || | ||||| || | || || ||||||| |
Sbjct 12446 TGAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGATCAGCGGCCATTTGAACA 12505
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234
|| || ||| | ||| ||||| | || || |||| | ||| || || |||||| |
Sbjct 12506 ATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGTGCCTTGATGTCAGCTGGAATG 12565
Query 62235 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291
|| | | || ||||| || |||||||| || || || | ||||| || | || |
Sbjct 12566 TTGGGAATGTTTTGAATAGAACCACCATCAGCGATGATACGGTTCTTCATGTTGTCTGAC 12625
Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351
|||||| | ||| | | | | || || || ||||| ||||| |||||||||
Sbjct 12626 CATAATCCCATGTCGACAAGATCCTTGAGCAGCCATGGGTTAACAACTTGGAATTCTCCA 12685
Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411
| ||| || | |||| ||| || ||| || || ||||| | |||| || ||
Sbjct 12686 GCCAAGACACGACGAGAGTAGATGTTAGAAGTGTATGGTTCAAAGCACTCGTTGAAACCG 12745
Query 62412 AAAATTTGAGCAGTTGATG-CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470
| |||||||| || || || | || |||||||| || || | ||||| || | | |||
Sbjct 12746 AGAATTTGAG-AGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACTGTTGCGGACACC 12804
Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAACNN 62529
|| | | |||| || | || || | ||||| | |||||| || | ||| |||
Sbjct 12805 GTGTTGTTTGATGG-ATTTCTTCAAGCTATCCCAGTCCCAAAGGTCGGTAGGTGTAACTC 12863
Query 62530 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 62589
||| || || || | | || ||| | || || || || |
Sbjct 12864 CCCACATATCGTATTGAAGTTCGCCCTTCGAGACAGGTGAGCCTTCGTAGGTCTCATAGG 12923
Query 62590 GTCCTTCCTTCTCAGCTAGTTCACAACTCGCC-TCT-AATGCACCGTAATAAATGGTTTC 62647
|| || || ||| | || |||| | | | || ||| ||| ||||| |||||
Sbjct 12924 TACCCAACTCCTTAGCAA--TCTCAACGGACGATGTCAAAGCAGCGTGGTAAATAGTTTC 12981
Query 62648 GAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTAT-CAAATGGATAATTTAAGAGA 62705
|||||| | | || || | |||| ||||| ||| || ||||||| |||| |||||
Sbjct 12982 GAAGATTTGAATGTTGAGGTGCTTG-GCTTC-AGGTGATTCAAATGG-TAATCGAAGAGC 13038
Query 62706 -ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764
| ||| || || || | ||||||||||| | | ||||||||| ||| | ||| |
Sbjct 13039 CAAAAAAGCATCGGCAAGACCTTGAACACCGACAGCGATAGGTCGATGACGGAAATT-GC 13097
Query 62765 GATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62823
|||| | | ||||| | || || || || || || || || || || | |||||||
Sbjct 13098 TCTTTCTGGCCTCTGGGACGGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTTCTGA 13157
Query 62824 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTAT-TACA 62879
||| |||| || || | || || | ||||| | || | ||| || | ||
Sbjct 13158 CAACGACTTGAGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTTCCCTCATTCATGTCCA 13217
Query 62880 AACATGTTCA-AG-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 62937
| ||||| || |||| || |||| ||||| || || |||| | | | |
Sbjct 13218 CAAATGTTGGGAGAGCAATGGAAGCCAAGTTACAGCAAGCGACTTCATCTGGGGCAGAGT 13277
Query 62938 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTAC 62997
||| | || || ||||| | ||| | || || || | || | ||| || |
Sbjct 13278 ATTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATGGTGCCGAGGTTCTTTTGGTTGC 13337
Query 62998 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 63057
|||| ||||| || |||||||| ||||| ||||||||| | || || ||| | |||| |
Sbjct 13338 TCTTCTTGTTGCATGCATCCTTGTAAAGCATGAATGGATTTCCGGTCTCAGTTTGAGCCT 13397
Query 63058 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA----GATTTGTATCTCCTTTCT 63113
| | ||| | | ||| | | | || || || | || | || || | ||||
Sbjct 13398 CGAGAATGGAGTACCAAAGCTTTTGGGCTTTGATGGTCTTGCGACCTCTACCTTCCTTCT 13457
Query 63114 CTT---TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 63170
| | || |||| | | | ||| |||||||| || | |||| |||| |||
Sbjct 13458 CATAACTCTCATAGAG------AGC-TTCAAACTCGTCGCCATATACATCAGCCAACCCA 13510
Query 63171 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63230
|||||||||| || ||||| | | ||| || ||| | | || || ||||| |||
Sbjct 13511 GGACATTCATTGGGGCACATTAGTGTCCAATCCGCGTTCTTTTCAACACGCTTCATGAAG 13570
Query 63231 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63289
||||| |||||||| | || ||| || ||||| | || | ||| || || ||
Sbjct 13571 AGATCCGGAATCCACA-AGGCATAGAAAAGATCACGGGCGCGGACTTCTTCCTTGCCGTG 13629
Query 63290 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63349
|||||| || || |||||| | | || ||| | ||||| || || | || | ||
Sbjct 13630 GTTCTTTCGGAGGTCCAGGAACTCGAAAACATCTGCGTGCCAAGGCTCAAGATAGACTGC 13689
Query 63350 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63409
| | ||||| || |||||||| || || || | ||||||||| |||||||| ||||
Sbjct 13690 AAATGCACCAGGACGCTTGTTTCCACCTTGGTCGACGTATCTAGCAGTGTTATTGAAAAC 13749
Query 63410 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACT 63469
|| | ||| || | || ||||| || |||| |||||||||| ||| || ||| |
Sbjct 13750 TCGTAGCATCGGTACGATGCCGTTGGAGTTACCGTTGGTACCGGCGATGTATGCACCAGT 13809
Query 63470 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63529
|||||| || | ||| ||||| || || || || |||||||||| | || ||
Sbjct 13810 GGCACGGATTCTGTGAATGTTGAGACCAATACCTCCAGCATTTTTAGAGATCATAGCACA 13869
Query 63530 TCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63589
| || | || ||||| ||||| || || ||||| || |||| | || || || ||
Sbjct 13870 TGTCTTGAGGGTATCATAAATACCATCAATACTATCCTCCTTCATATCAATGAGGAAGCA 13929
Query 63590 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63649
|| | || | || || || || | ||||| || ||||| || ||
Sbjct 13930 TGATGAAAGCTGTGCTTGTGGTGTACCAGCGGAGAAAAGTGTAGGGGAGGCGTGTGTGAA 13989
Query 63650 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63708
|||| | || | || ||||| |||||||| || || ||||| || | ||||
Sbjct 13990 GTATTTGTTGGACATAAGGTTGTAGGTCTCAATGGCGCTCTCGATATCGTCACCG-TGAA 14048
Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63748
| || || || |||||||| | ||| ||||| || | |||
Sbjct 14049 TACCAACGGCAACACGCATGATCATTTGCTGTGGACGTTC 14088
>seq845
Length=273148
Score = 98.7 bits (108), Expect = 1e-15
Identities = 570/919 (62%), Gaps = 65/919 (7%)
Strand=Plus/Plus
Query 32997 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33056
|| |||||| || || ||||| ||||| || | || ||||| || || || || ||
Sbjct 251320 AGCCATAACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTTGTCTTGCC 251379
Query 33057 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 33116
| | | || || || |||||||| || || || |||| | || || | || |
Sbjct 251380 TGCTAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGCAGACTTGTACACCTTCTCGT- 251438
Query 33117 TCCCAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCAT-TTCA 33174
| |||| || | | | ||| |||||||| || || ||| ||||||| |||
Sbjct 251439 TACCAAGAGCGACTAGGAGACGATCGGCGACGAACTCGATGTATTGCTTCATCAAGTTCG 251498
Query 33175 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT 33234
| ||||| || | |||| | ||||||||| | || | ||||||||||| ||
Sbjct 251499 CG-TTCATGCCAAGAAGTGCACAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATCTCA 251557
Query 33235 ACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTA 33294
|| || ||||| || | | | || | | | || || | ||| || ||
Sbjct 251558 ACAGCCTCTGTGATGACATCTTGGACAGCCTGCTTGCTTGGACGGTGCTTCAAGTGGGAG 251617
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|| | | || ||||| ||| || ||||| || || | || || || |||||
Sbjct 251618 AAGAGGAGGCACGCGAAGTCGGTATGGAGACCTTCATCACGGGAGATGAGCTCATTGGAG 251677
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || || || | ||| | ||||||||| || ||||| || || |||||||||||||||
Sbjct 251678 AAAGTAAGACCAGCCATCAAGCCACGCTTCTTGAGCCAGAAGATAGAAGCGAATGATCCA 251737
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT- 33473
|||||||| || || || |||||||| |||| || | || || | | | |
Sbjct 251738 CTGAAGAAGATGCCCTCAACAGCAGCAAAAGCAACCAGACGCTGAGCAAAGGTAGAGTTT 251797
Query 33474 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------- 33523
||| || ||||| | |||||| ||||| ||||| || | ||||| |
Sbjct 251798 TTGTCTTGAATCCATCTGACAGCCCAGTCGGCTTTCTTCTTAATGCAAGGAACTGTAGAG 251857
Query 33524 -------------------------------------------TCGTTTCTATGGCATTA 33540
| || || || |||||
Sbjct 251858 ATAGTTAGGAAATGTATTATTTAGACCAATGAATGTGACTCACTTGTCTCAATTGCATTG 251917
Query 33541 AAGAGATA-GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599
|||||||| ||| || | | || |||| || |||||||| | ||| || |
Sbjct 251918 AAGAGATATGTTCGTTGGGCTTGT-TCCTTAATGTATGTATCGATGAGGAGAGAGTATGT 251976
Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659
||| || || ||||| || || || || || |||||||| || | |||||||| ||
Sbjct 251977 TTCGGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAGCAACGAGCCTCGGGGAT 252036
Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719
|| ||||| || || || || | | || || || ||||||||||| |||||
Sbjct 252037 TTGAACTTCACCACTGAAGCGCTCGACAAGGTTCTCGTTGACTATTCCGTCGGATGCTGC 252096
Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC----TGGTGTTAGTTTATTCC 33775
|| || || | || || || ||||| || || | | ||| ||| |||||
Sbjct 252097 GAAGAATGCGAGGACGTGAGAGATGAAATAGCGCTCATCATCATTGAGTTTGTT-ATTCC 252155
Query 33776 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835
|||| | | || || || | || | ||||| ||||||| || |||||||| ||||
Sbjct 252156 AATCGTGAAGGTCCTTTGACAAGTCGATCTCTTCTGCTGTCCAGAAAGATGCCTCGGCCT 252215
Query 33836 TTTTATACATGTTCCAGAT 33854
|||| ||||| | ||||||
Sbjct 252216 TTTTGTACATTTGCCAGAT 252234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622934452942920
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