Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08-
07] 1,637 sequences; 39,468,807 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq586 320 4e-82
seq55 98.7 3e-15
>seq586
Length=108090
Score = 320 bits (354), Expect = 4e-82
Identities = 1163/1793 (65%), Gaps = 48/1793 (3%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||||| ||||| | ||| ||| ||||| ||| || |||| | ||| |||
Sbjct 14145 TTCGGATTCAAGACCCTCGAGCGATCGTACCTTCTTCGACTCGATGGAAAAGTTGCAGAA 14086
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
|| || ||||| ||| | ||||||||||| ||||||| || | ||| | || |
Sbjct 14085 CGTCCACAGCAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGACGATATCGAGAGC 14026
Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAA 363568
|| ||||| || || || ||| | || | | || ||||| |||||| | || |||
Sbjct 14025 GCCATTGAGACCTACAACCTTAT--GTCCAACAAATACTTCACACACGCCTCCCCTACAC 13968
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | | ||||| || | | ||||| | || || ||||| || | | |||||||
Sbjct 13967 TTTTCTCCGCTGGTACACCACAAGCACAGCTTTCATCATGCTTCCTCATTGATATGAAGG 13908
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
| ||| || || ||||| | ||| || || |||| |||||| | || || || ||||
Sbjct 13907 AGGATAGTATTGATGGTATTTATGATACCCTCAAGACATGTGCTATGATCTCTAAAAATG 13848
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGG 363746
| || || |||||| | || |||| | ||||| || | || ||||| |||
Sbjct 13847 CTGGAGGTATTGGTCTCAACATTCACAGAATCCGTGCCACTGGTGCA--TACATCGCCGG 13790
Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
|| || |||| || || | || || ||||| || || || | || ||||| ||
Sbjct 13789 TACCAACGGTAACTCCAACGGCATCGTACCGATGCTACGAGTTTTCAATAACACTGCTAG 13730
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
||||||||||| |||||| ||||| || || ||||| | ||||| ||||||
Sbjct 13729 ATACGTCGACCAAGGTGGAAACAAGCGTCCTGGTGCATTTGCAGTCTATCTTGAGCCTTG 13670
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
|| || ||| |||| ||||| || || ||||| || ||| || || || ||| | ||
Sbjct 13669 GCACGCAGATGTTTTCGAGTTCCTGGACCTCCGAAAGAACCACGGCAAGGAAGAAGTCCG 13610
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG--AG 363984
|| |||||||| |||||||| | ||| || | || | || |||||||| || | |
Sbjct 13609 CGCCCGTGATCTTTTCTATGCCTTGTGGATTCCGGATCTCTTCATGAAGCGTGTTGAAAA 13550
Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
| | | | ||||| |||| | ||||| | |||||||| || | | |||||||
Sbjct 13549 GAACG--CGGATTGGACACTAATGTGCCCCAATGAATGTCCTGGGTTGGCTGATGTATAT 13492
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104
|| ||||| | || ||||| || || | ||||| ||| || | | ||| |||||
Sbjct 13491 GGCGACGAGTTTGAAGCTCTCTATGAGAGTTATGAGAAGGAAGGTAGAGGTCGCAAGACC 13432
Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164
|| || || ||||| |||| |||| | || | || | |||||| |||| ||
Sbjct 13431 ATCAAAGCCCAAAAGCTTTGGTACTCCATTCTCGAGGCTCAAACTGAGACCGGAAATCCA 13372
Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224
| ||| | ||||| ||| | |||||| ||| |||||| || |||| || || |||
Sbjct 13371 TTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTCGGCACCATT 13312
Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283
| |||| ||| | || || || ||| | |||||| | || || || || ||
Sbjct 13311 C-GCAGCTCCAATTTGTGCACAGAAATTGTCGAATACTCTGCCCCAGATGAAGTCGCTTG 13253
Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTTGA 364337
|||||| | || || || || || || | |||| | || || || |||| ||
Sbjct 13252 CTGTAACTTGGCTTCCATTGCTCTCCCAACATTTGTGGACATGAATGAGGGAACTTACGA 13193
Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG---CAATCTCG-ACAAGGTTA 364393
||| | ||| | || || || ||| | | ||| || || | ||||| | |
Sbjct 13192 TTTCCAAAAGCTTCACGAGGTTAC---TCAAG-TCGTTGTCAGAAACTTGAACAAGATCA 13137
Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCG 364452
| |||| || || || || | || || ||| || | | ||| | |||||||| ||
Sbjct 13136 TTGACATCAACTACTACCCCGTCCCAGAGGCCAGAAAGAGC-AATTTCCGTCATCGACCT 13078
Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC-AAGA-TGGCATTTG 364510
|| | | | ||||| || || || || || | |||| || |||| || | ||||||
Sbjct 13077 ATCGCTGTCGGTGTTCAAGGTCTTGCCGATGCTTTTTTG--GCTCTTCGATTACCATTTG 13020
Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570
| || ||||| || || || | | ||||| ||||| || || || ||
Sbjct 13019 AATCACCTGAAGCCAAGCACCTCAACATTCAAATCTTCGAAACTATTTACCACGCTGCTT 12960
Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630
|||| | || ||| | || || ||| | || || || || || || |
Sbjct 12959 TGACATCGTCCGTTGAGATTGCTAAGGAGTTGGGTACCTATGAGACCTACGAAGGCTCAC 12900
Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690
|| | ||| |||| || | || | ||| | ||| || || || | | || |||
Sbjct 12899 CTGTCTCGAAGGGCGAACTTCAATACGATATGTGGGGAGTTACACCTACCGACCTTTGGG 12840
Query 364691 ACTGGGATACGCT--ACG--TTCCAACGTTAAGAAGCATGGTACTCGCAAC---TCCCTC 364743
||||||||| ||| | | |||| | || | || ||| |||||| | |||
Sbjct 12839 ACTGGGATA-GCTTGAAGAAATCCA---TCAAACAACACGGTGTCCGCAACAGTTTGCTC 12784
Query 364744 GTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTC 364803
||| || || ||||| || || || | || || ||||| ||||||||||||
Sbjct 12783 GTT---GCTCCTATGCCAACAGCCAGCACCTCTCAAATTCTCGGTTTCAACGAGTGCTTT 12727
Query 364804 GAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTT 364863
||||| | || || | || || || || || | | |||||||| | || |||
Sbjct 12726 GAACCATACACTTCTAACATCTACTCTCGTCGTGTCTTGGCTGGAGAATTCCAAGTTGTT 12667
Query 364864 AATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAAC 364923
|| | || ||||||||||| |||| || | ||| |||| ||||||||||
Sbjct 12666 AACCCATGGCTGCTCAAGGATCTTGTCGACATGGGATTATGGTCAGACAACATGAAGAAC 12607
Query 364924 TATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAG 364983
||||||||| | | ||||||| | || |||||||| |||||| || | |||
Sbjct 12606 CGTATCATCGCTGATGGTGGTTCTATTCAAAACATTCCCAACATTCCAGCTGACATCAAG 12547
Query 364984 CCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGAT 365043
| ||||||| ||||| ||||| ||||| ||||| | || | ||||| || |||
Sbjct 12546 GCACTTTACAAGACCGTCTGGGAGATTTCTCAACGAACAATTGTTCAAATGGCCGCTGAT 12487
Query 365044 CGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCC 365103
|| ||||| ||| | ||| || || | ||| | ||||| | || ||
Sbjct 12486 CGTGGTGCCTTTGTTGACCAGTCACAATCAATGAACATTCACATGAAAGACCCCACAATG 12427
Query 365104 GCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| |||| |||||||||||| ||| ||||||| ||||| ||||| ||
Sbjct 12426 GGCAAGATTACTTCCATGCATTTCGCCGGTTGGAAATTGGGTCTCAAGACCGG 12374
>seq55
Length=76876
Score = 98.7 bits (108), Expect = 3e-15
Identities = 102/129 (79%), Gaps = 6/129 (5%)
Strand=Plus/Minus
Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATT-CAGTTGGTCTTGTCGA 111478
|||||||| |||||||| |||||||| || || ||||||||| ||| | |||| | |
Sbjct 14845 GTAAAAATCTGGGATGGCAATGGATCGCGCGAATTTCTAGATAGCAGAGG--CTTGAC-A 14789
Query 111479 CAACG--AAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCA 111536
|| || ||| |||||||| || ||||| || || ||||||||||| |||||||| ||
Sbjct 14788 CACCGTGAAGTTGGTGATCTTGGGCCAGTCTATGGCTTTCAATGGCGACACTTTGGGGCC 14729
Query 111537 GACTACAAA 111545
|| ||||||
Sbjct 14728 GAATACAAA 14720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303326263380134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |