Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08-
07] 1,637 sequences; 39,468,807 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq845 127 5e-24
>seq845
Length=273148
Score = 127 bits (140), Expect = 5e-24
Identities = 181/252 (72%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562
|||||||||| || ||||| | |||| | |||||| | ||| ||| |||| || |
Sbjct 251573 TCATCACAGAGGCTGTTGAGATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGTGCAC 251514
Query 243563 TTATTGGCATGAACTCTGAACTC-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| ||||||||||| | ||||| ||| || |||||||| ||||| ||||| || |
Sbjct 251513 TTCTTGGCATGAACGC-GAACTTGATGAAGCAATACATCGAGTTCGTCGCCGATCGTCTC 251455
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| |||| |||||| | ||||| |||||||| || ||||| || | ||| ||||||
Sbjct 251454 CTAGTCGCTCTTGGTAACGAGAAGGTGTACAAGTCTGCCAACCCATTCGACTTCATGGAG 251395
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| || || ||| || || ||||||||||| ||| | || |||| || ||
Sbjct 251394 AACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 251335
Query 243742 CCTGGTGTGATG 243753
||||||| |||
Sbjct 251334 GCTGGTGTTATG 251323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102856868125950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |