Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08- 07] 1,637 sequences; 39,468,807 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq845 127 5e-24 >seq845 Length=273148 Score = 127 bits (140), Expect = 5e-24 Identities = 181/252 (72%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562 |||||||||| || ||||| | |||| | |||||| | ||| ||| |||| || | Sbjct 251573 TCATCACAGAGGCTGTTGAGATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGTGCAC 251514 Query 243563 TTATTGGCATGAACTCTGAACTC-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||||||||| | ||||| ||| || |||||||| ||||| ||||| || | Sbjct 251513 TTCTTGGCATGAACGC-GAACTTGATGAAGCAATACATCGAGTTCGTCGCCGATCGTCTC 251455 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| |||||| | ||||| |||||||| || ||||| || | ||| |||||| Sbjct 251454 CTAGTCGCTCTTGGTAACGAGAAGGTGTACAAGTCTGCCAACCCATTCGACTTCATGGAG 251395 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || || ||| || || ||||||||||| ||| | || |||| || || Sbjct 251394 AACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 251335 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 251334 GCTGGTGTTATG 251323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102856868125950