Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08-
07] 1,637 sequences; 39,468,807 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq586 152 6e-32
seq845 100 3e-16
>seq586
Length=108090
Score = 152 bits (168), Expect = 6e-32
Identities = 925/1466 (63%), Gaps = 47/1466 (3%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
|||||||||| ||| | |||| | | |||||||||||||| || |||||||| |
Sbjct 12327 TGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGTCTTGAGAC 12386
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
|| ||||| | | |||||| || | | |||| | ||| || || ||||
Sbjct 12387 CCAATTTCCAACCGGCGAAATGCATGGAAGTAATCTTGCCCATTGTGGGGTCTTTCATGT 12446
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
| |||||| ||| || || || | ||| |||||||| || ||||| | || ||
Sbjct 12447 GAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGATCAGCGGCCATTTGAA-CA 12505
Query 113745 CATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802
|| ||| | || | ||||| || || |||| || ||| || ||| |||| ||
Sbjct 12506 -ATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGTGCCTTGATGTCAGCTGGAAT 12564
Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862
| || ||||| || || ||||| | || || | | |||||| | | |||
Sbjct 12565 GTTGGGAATGTTTTGAATAGAACCACCATCAGCGATGATACGGTTCTTCATGTTGTCTGA 12624
Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 113920
||| | || || | ||||||| | || ||| | | ||||| || ||
Sbjct 12625 CCATAATCCCATGTCGACAAGATCCTTGAGCAGCCATGGGT--TAACAACTTGGAATTCT 12682
Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979
|| || | | || | ||| ||||| || | |||||||| ||||||||||| |||
Sbjct 12683 CCAGCCAAGACACGACG-AGAGTAGATGTTAGAAGTGTATGGTTCAAAGCACTCGTTGAA 12741
Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039
||| | ||||| | |||| |||||| ||||| || || | ||| | ||||| ||||
Sbjct 12742 ACCGAGAATTTGAGAGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACTGTTGCGGAC 12801
Query 114040 ACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GTTG--AGCTTTGTC 114094
||| | || | ||| || ||| | | |||||||| | || | || | | |
Sbjct 12802 ACCGTGTTGTTTGATGGATTTCTTCAAGCTATCCCAGTCCCAAAGGTCGGTAGGTGTAAC 12861
Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154
||||| ||||||| | || || || | ||| | || || || || | |||
Sbjct 12862 TCCCC-----ACATATCGTATTGAAGTTCGCCCTTCGAGACAGGTGAGCCTTCGTAGGTC 12916
Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 114214
|| || | ||| ||| || | || | || | || ||||| || ||
Sbjct 12917 TCATAGGTACCCAACTCCTTAGCAATCTCAACGGACGATGTCAAAGCAGCGTGGTAAATA 12976
Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GC 114272
|| || || || || || | |||||| || || ||||| | | ||| |
Sbjct 12977 GTTTCGAAGATTTGAATGTTGAGGTGCTTGGCTTCAGGTGATTCAAATGGTAATCGAAGA 13036
Query 114273 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 114332
| ||| || |||| || |||||||| ||||||| | || || ||||| | | ||
Sbjct 13037 GCCAAAAAAG--CATCGGCAAGACCTTGAACACCGACAGCGATAGGTCGATGACGGAAAT 13094
Query 114333 TAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391
| ||||| || ||| ||||| || | || | || || | | | || | |||
Sbjct 13095 TGCTCTTTCTGGCC-TCTGGGACGGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTT 13153
Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC-TTC 114450
|| || || | || | || |||||||||| | |||| || | | ||| |||
Sbjct 13154 CTGACAACGACTTGAGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTTCC---CTCATTC 13210
Query 114451 ATTG--ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508
|| ||| | | || || || || || |||| ||||| || | |||||
Sbjct 13211 ATGTCCACAAATGTTGGGAGAGCAATGGAAGCCAAGTTACAGCAAGCGACTTCATCTGGG 13270
Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568
||| ||| || | |||||| || |||||||| || || ||||||||| | |||||||
Sbjct 13271 GCAGAGTATTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATGGTGCCGAGGTTCTTT 13330
Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628
|| || ||| |||| || |||||||||||||||||| |||| | || ||||| |||
Sbjct 13331 TGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAATGGATTTCCGGTCTCAGTT 13390
Query 114629 TGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTG---GCTCGC 114685
|| | || |||||| | | ||| | | |||| | ||| ||| |||
Sbjct 13391 TGAGCCTCGAGAATGGAGTACCAAAGCTTTTGGGCTTTGA---TGGTCTTGCGACCTCTA 13447
Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745
|| |||| ||| || | ||||| ||||||||||| || || | || | | |
Sbjct 13448 CCTTCCTTCTCATAACTCTCATAGAGAGCTTCAAACTCGTCGCCATATACATCAGCCAAC 13507
Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805
|| || | || ||||| | || | ||| | | || |||||||||||||||
Sbjct 13508 CCAGGACATTCATTGGGGCACATTAGTGTCCAATCCGCGTTCTTTTCAACACGCTTCATG 13567
Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865
||||| || || ||||| | || |||| ||||| || ||| ||||||| | ||
Sbjct 13568 AAGAGATCCGGAATCCACAAGGCATAGAAAAGATCACGGGCGCGGACTTCTTCCTTGCCG 13627
Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925
|| || || | |||| || || | | ||| |||||||| || || || || ||
Sbjct 13628 TGGTTCTTTCGGAGGTCCAGGAACTCGAAAACATCTGCGTGCCAAGGCTCAAGATAGACT 13687
Query 114926 GCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979
|| | || || | |||| ||| | |||| || || || || ||| |||
Sbjct 13688 GCAAATGCACC---AGGACGCTTGTTTCCACCTTGGTCGACGTATCTAGCAGTGTTATTG 13744
Query 114980 AATACGCGAAGCATTGGAATGATACC 115005
|| || || ||||| || | ||| ||
Sbjct 13745 AAAACTCGTAGCATCGGTACGATGCC 13770
>seq845
Length=273148
Score = 100 bits (110), Expect = 3e-16
Identities = 111/148 (75%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118
|||||||| || |||||||||||||| ||||| ||||| || || | ||| | ||
Sbjct 251642 TGGAGACCTTCATCACGGGAGATGAGCTCATTGGAGAAAGTAAGACCAGCCATCAAGCCA 251701
Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178
|||||||| | |||||| || | | ||||| || ||||||||| ||||| |||
Sbjct 251702 CGCTTCTTGAGCCAGAAGATAGAAGCGAATGATCCACTGAAGAAGATGCCCTCAACAGCA 251761
Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGG 126206
|| || |||| ||||||| ||||||||
Sbjct 251762 GCAAAAGCAACCAGACGCTGAGCAAAGG 251789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597341376651960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |