Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08-
07] 1,637 sequences; 39,468,807 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq95 111 2e-18
seq845 89.7 8e-12
>seq95
Length=128761
Score = 111 bits (122), Expect = 2e-18
Identities = 90/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| |||||||||||||| ||||| | |||||||| | || ||||||||||| |||||
Sbjct 8424 GCTGCCAACTACCTCGATATCAAAGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCCAAT 8365
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| || || || ||||| ||||| ||||||||||
Sbjct 8364 ATGATCAAGGGCAAGTCCCCAGAAGAAATCCGAAAGACATTTAACATCA 8316
>seq845
Length=273148
Score = 89.7 bits (98), Expect = 8e-12
Identities = 151/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984
|||||| ||||| |||||||| | || ||||| |||||| | ||| ||||||||
Sbjct 251359 CTCGAAGAAGTTTGTCTTGCCTGCTAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGC 251418
Query 793985 CGTCAGGTAGTGCTTCTCGCACCC--GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCA 794042
| | ||| ||||||| || ||||||| || || || ||||||||||| ||
Sbjct 251419 AGACTTGTACACCTTCTCGTTACCAAGAGCGACT--AGGAGACGATCGGCGACGAACTCG 251476
Query 794043 ATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTG 794102
||||| || ||| | | ||||||||||| | || || || || | |||| |
Sbjct 251477 ATGTATTGCTTCATCAAGTTCGCGTTCATGCCAAGAAGTGCACAAGGAAGAGCCTCGGTC 251536
Query 794103 ACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139
| || |||| |||||||| || ||||| ||||||
Sbjct 251537 AAGAATTCTTGTTCGATCTCAACAGCCTCTGTGATGA 251573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916072264843643
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |