Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08- 07] 1,637 sequences; 39,468,807 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq95 111 2e-18 seq845 89.7 8e-12 >seq95 Length=128761 Score = 111 bits (122), Expect = 2e-18 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || |||||||||||||| ||||| | |||||||| | || ||||||||||| ||||| Sbjct 8424 GCTGCCAACTACCTCGATATCAAAGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCCAAT 8365 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| || || || ||||| ||||| |||||||||| Sbjct 8364 ATGATCAAGGGCAAGTCCCCAGAAGAAATCCGAAAGACATTTAACATCA 8316 >seq845 Length=273148 Score = 89.7 bits (98), Expect = 8e-12 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| ||||| |||||||| | || ||||| |||||| | ||| |||||||| Sbjct 251359 CTCGAAGAAGTTTGTCTTGCCTGCTAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGC 251418 Query 793985 CGTCAGGTAGTGCTTCTCGCACCC--GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCA 794042 | | ||| ||||||| || ||||||| || || || ||||||||||| || Sbjct 251419 AGACTTGTACACCTTCTCGTTACCAAGAGCGACT--AGGAGACGATCGGCGACGAACTCG 251476 Query 794043 ATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTG 794102 ||||| || ||| | | ||||||||||| | || || || || | |||| | Sbjct 251477 ATGTATTGCTTCATCAAGTTCGCGTTCATGCCAAGAAGTGCACAAGGAAGAGCCTCGGTC 251536 Query 794103 ACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 | || |||| |||||||| || ||||| |||||| Sbjct 251537 AAGAATTCTTGTTCGATCTCAACAGCCTCTGTGATGA 251573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916072264843643