Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3070 82.4 8e-11
>seq3070
Length=35956
Score = 82.4 bits (90), Expect = 8e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || ||||||||||| || ||| |||||||||| || |||||||| || ||
Sbjct 29134 ATGTATGTATCGATGAGGAGAGAGTATGTTTCGGAGTGGATATTCTCCATCATAATTTGG 29193
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || || | ||||||||||| | ||| || || | ||
Sbjct 29194 AAACCGTAGAAGCAACGAGCCTCGGGGATTTGAACTTCACCACTGAAGCGCTCGACAAGG 29253
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
|| ||||| || || |||||| || ||||| || ||
Sbjct 29254 TTCTCGTTGACTATTCCGTCGGATGCTGCGAAGAATGC 29291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517522245754800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |