Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq65 113 4e-20
>seq65
Length=14011
Score = 113 bits (124), Expect = 4e-20
Identities = 119/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 5597 TGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACC 5656
||||| | ||||||||| ||| |||||||||||| ||| ||| ||| ||||||| |
Sbjct 349 TGCGCAACACGGTCGCCCTCCTTCACCTCGAAATCGGTGTCTCCGTGGTTAAACAGCAGC 290
Query 5657 ACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGC 5716
|| || | || || || || || || ||||||||||||||| |||||| | |||
Sbjct 289 ACCTTTACTTGACCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCATGTGT 230
Query 5717 TTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
||| || ||||||||||||||||| | ||| ||||
Sbjct 229 TTGGATGCTAGGCCGGAGCGGGGAGCTATGCGTCCGT 193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430035478950320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |