Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq443 91.5 1e-13
>seq443
Length=6205
Score = 91.5 bits (100), Expect = 1e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| || | ||| || || ||||||||||| |||||||||||| || ||| | | ||
Sbjct 3629 AGGACGAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGGCCATCT 3688
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | |||||||||||| | || | |||||||||||| || | ||||| || ||
Sbjct 3689 TCAAGTTGTTTGCCCGCGAAGATCAAGCGCTGTTGGTCCGGGGGAATTCCCTCCTTATCC 3748
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | ||| |||| || ||| || | |||||||||
Sbjct 3749 TGAATCTTGCT-CTTTACGTTGTCGATAGTATCGCTGGACTCGACCTCGAGGGTGATGGT 3807
Query 16903 TTTTCCGGT 16911
|| |||||
Sbjct 3808 CTTGCCGGT 3816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405070177393900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |