Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08- 07] 3,610 sequences; 36,184,363 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq65 82.4 2e-11 >seq65 Length=14011 Score = 82.4 bits (90), Expect = 2e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 1103 ACGGTCGGGTGGCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTGATAGACGTGGGGGCGG 1162 |||| || | || || ||||| || || || | ||| |||| ||| ||| |||| Sbjct 193 ACGGACGCATAGCTCCCCGCTCCGGCCTAGCATCCAAACACATGATCGACACGGGCGCGG 252 Query 1163 GCGTGGTGGATCCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACCTGTCGGACC 1222 ||||| | ||| | | ||| ||||| |||| |||||| |||||||||||| ||| Sbjct 253 GCGTGATCGATGCGGATTATCGGGGTCAAGTAAAGGTGCTGCTGTTTAACCACGGAGACA 312 Query 1223 ACAATTTCAACGTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAG 1272 | ||||| | ||| |||||| ||| | | ||||| |||| |||||| Sbjct 313 CCGATTTCGAGGTGAAGGAGGGCGACCGTGTTGCGCAATTGGTGTTGGAG 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145193775457500