Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_014564.2
Length=45413
Score E
Sequences producing significant alignments: (Bits) Value
seq65 82.4 2e-11
>seq65
Length=14011
Score = 82.4 bits (90), Expect = 2e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 1103 ACGGTCGGGTGGCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTGATAGACGTGGGGGCGG 1162
|||| || | || || ||||| || || || | ||| |||| ||| ||| ||||
Sbjct 193 ACGGACGCATAGCTCCCCGCTCCGGCCTAGCATCCAAACACATGATCGACACGGGCGCGG 252
Query 1163 GCGTGGTGGATCCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACCTGTCGGACC 1222
||||| | ||| | | ||| ||||| |||| |||||| |||||||||||| |||
Sbjct 253 GCGTGATCGATGCGGATTATCGGGGTCAAGTAAAGGTGCTGCTGTTTAACCACGGAGACA 312
Query 1223 ACAATTTCAACGTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAG 1272
| ||||| | ||| |||||| ||| | | ||||| |||| ||||||
Sbjct 313 CCGATTTCGAGGTGAAGGAGGGCGACCGTGTTGCGCAATTGGTGTTGGAG 362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145193775457500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |