Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq60 194 2e-44
seq3070 129 7e-25
>seq60
Length=14677
Score = 194 bits (214), Expect = 2e-44
Identities = 1145/1804 (63%), Gaps = 51/1804 (3%)
Strand=Plus/Minus
Query 111556 TCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATGGAAACCCCAC 111615
|||||||||||||| | ||||| | |||| ||||| | ||| ||||
Sbjct 9749 TCAAGACCCTCGAGCGATCGTACCTTCTTCGACTCGATGGAAAAGTTGCAGAACGTCCAC 9690
Query 111616 AGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGG 111675
| | ||| ||||||| || || | ||||| || || || ||||| || | | |
Sbjct 9689 AACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGACGATATCGAGAGCGCCATTG 9630
Query 111676 AGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACG 111735
|||| ||| || |||||| |||| ||||| | || || || ||| ||
Sbjct 9629 AGACCTACAACCTTATGTCCAACAAATACTTCACACACGCCTCCCCTACACTTTTCTCCG 9570
Query 111736 CTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAA 111795
||||||||||| | | || | || || ||||| |||| | |||||||| |
Sbjct 9569 CTGGTACACCACAAGCTCAGCTTTCATCATGCTTCCTCATTGATATGAAGGAGGACAGTA 9510
Query 111796 TCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTA 111855
| |||| ||||| | || |||| |||||| ||||| || ||||| ||||
Sbjct 9509 TTGATGGTATTTATGATACCCTCAAGACATGTGCTATGATCTCTAAAAATGCTGGAGGTA 9450
Query 111856 TCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGT 111914
| || | |||| || || | |||| | || | || ||||| || |||
Sbjct 9449 TTGGTCTCAACATTCACAGAATCCGTGCCA-CTGGTGCATACATCGCCGGTACCAACGGT 9391
Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974
| || | || || | || ||||| || || || ||| ||| || | || || ||
Sbjct 9390 AACTCCAACGGCATCGTACCCATGCTACGAGTTTTCAACAACACTGCTAGATACGTCGAC 9331
Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028
|||| ||| ||||| | || | ||||||||||||||||| ||||||||
Sbjct 9330 CAAGGTGGAAACAAGCGTCCTGGTGCATTT---GCAGTCTATCTTGAGCCTTGGCACGCA 9274
Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGC 112088
||| | | |||||||| || | || ||||| || | || || | || |||
Sbjct 9273 GATGTTTTCGAGTTCCTGGACCTTCGAAAGAACCATGGCAAGGAAGAAGTCCGCGCCCGT 9214
Query 112089 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 112148
||||| |||| || | |||||||| ||||||||||||||| | ||||| ||| |
Sbjct 9213 GATCTTTTCTATGCCTTGTGGATTCCGGATCTCTTCATGAAGCGTGTTGAAAAGAACGCG 9154
Query 112149 AATTGGTCTCTCTTTTGTCCAGACAAGGCA---CCCGGTCTCTCCGATGCCGTGGGTGAG 112205
||||| | || | || || ||| | | || || | | |||| || ||
Sbjct 9153 GATTGGACACTAATGTGCCC---CAATGAATGTCCTGGGTTGGCTGATGTATATGGCGAC 9097
Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGC 112263
||||||||||| ||||| | || ||| | ||| || | | | | || ||| |
Sbjct 9096 GAGTTTGAAGCTCTCTATGAGAGTTATGAGAAGGAAGGTAGAG-GTC-GCAAGACCATCA 9039
Query 112264 CAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323
||| | | ||| | | |||||| || ||||||||||||| || | |||| |
Sbjct 9038 AAGCCCAAAAGCTTTGGTACTCCATTCTCGAGGCTCAAACCGAGACCGGAAATCCATTCA 8979
Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 112383
|||||||||| || || || ||| | ||||| || |||||||| | || || |
Sbjct 8978 TGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTCGGCACCATTCGCA 8919
Query 112384 GTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 112443
| ||||| | || |||||||| | |||| | | | |||||| ||| ||||
Sbjct 8918 GCTCCAATTTGTGCACAGAAATTGTCGAATACTCTGCCCCAGATGAAGTCGCTTGCTGTA 8859
Query 112444 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTGATTAT 112502
|| | || || || |||||||| | | |||||| | || | | || | ||||
Sbjct 8858 ACTTGGCTTCCATTGCTCTCCCAACATTTGTGGA-CATGAATGAGGGAACTTACGATTTC 8800
Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562
|||| || ||||| ||||| || || | |||| | |||| | ||||| |
Sbjct 8799 CAAAAGCTTCACGAGGTTACTCAAGTCGTTGTCAGAAACTTGAACAAGATCATTGACATC 8740
Query 112563 AATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 112621
|| | |||||||| ||| || | || ||| | | || || || || | | |
Sbjct 8739 AACTACTACCCCGTCCCAGA-GGCCAGAAAGAGCAATTTCCGTCATCGACCTATCGCTGT 8681
Query 112622 CGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 112681
|||||| |||||||| || |||| ||| | | ||| ||||||| || ||
Sbjct 8680 CGGTGTTCAAGGTCTTGCCGATGCTTTCTTGGCTCTTCGATTACCATTTGAATCACCTGA 8621
Query 112682 AGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAG 112741
||| ||| | |||| | || || || || || || ||||| ||| |||| |
Sbjct 8620 AGCCAAGCACCTCAACATTCAAATCTTCGAAACTATTTACCACGCTGCT-TTGA-CATCG 8563
Query 112742 TTCG--GAGTTGGC--AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797
| || ||| | || || |||| ||| | ||||| || | || || || || | |
Sbjct 8562 TCCGTTGAGATTGCTAAGGAGTTG--GGTACCTATGAGACTTACGAAGGCTCACCTGTCT 8505
Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGG 112856
| | || | ||||||| |||||||||| | || | ||| | | | | ||||||
Sbjct 8504 CGAAGGGCGAACTTCAATACGATATGTGGGGA-GTTACACCTACCGACCTTTGGGACTGG 8446
Query 112857 GA-CGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915
|| ||| | ||| || |||||| | | ||| | || |||||| | | | || ||
Sbjct 8445 GATAGCT-TGAAGAAATCCATCAAACAACACGGTGTCCGCAACAGTTTGCTCGTTGCTCC 8387
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
|||||||||||| |||| | ||||| | ||| || || ||||||||||| |||||
Sbjct 8386 TATGCCAACAGCCAGCACCTCTCAAATTCTCGGTTTCAACGAGTGCTTTGAACCATACAC 8327
Query 112976 GACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT- 113033
| |||||||| ||| | | | | || ||||| || |||| ||| |||
Sbjct 8326 TTCTAACATCTACTCT-CGTCGTGTCTTGGCTGGAGAATTCCAAGTTGTTAAC--CCATG 8270
Query 113034 -CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092
|| | | || || || || || | ||||| | | |||||| | | ||| |
Sbjct 8269 GCTGCTCAAGGATCTTGTCGACATGGGATTATGGTCAGACAACATGAAGAACCGCATCAT 8210
Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152
| |||||||| |||||||| ||| | ||||||| ||| || ||| | ||
Sbjct 8209 CGCTGACGGTGGTTCTATTCAAAACATTCCCAACATTCCAGCTGACATCAAGGCACTTTA 8150
Query 113153 CCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 113210
| || || ||||| | || | ||| | | || | |||||||| |||||||||
Sbjct 8149 CAAGACCGTCTGGGAGATTTCTCAACGAACAA--TTGTTCAAATGGCCGCTGATCGTGGT 8092
Query 113211 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCA 113268
||| |||| | ||||| | | ||||| | |||| || || || ||| ||
Sbjct 8091 GCCTTTGTTGACC--AGTCACAATCAATGAACATTCACATGAAAGACCCCACAATGGGCA 8034
Query 113269 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 113328
|| | |||| ||||| | | ||||||| ||||||||| || || ||||| ||||
Sbjct 8033 AGATTACTTCCATGCATTTCGCCGGTTGGAAATTGGGTCTCAAGACCGGAATGTACTACC 7974
Query 113329 TCCG 113332
||||
Sbjct 7973 TCCG 7970
>seq3070
Length=35956
Score = 129 bits (142), Expect = 7e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTC 102166
|||||||| || ||| | |||||||| || |||||| | | ||| || | ||||| |
Sbjct 29037 ACAGTTCCTTGCATTAAGAAGAAAGCCGACTGGGCTGTCAGATGGATTCAAGACAAAAAC 28978
Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226
| | |||||||| |||| || | || ||||| ||||||||| ||||||||| |||
Sbjct 28977 TC-TACCTTTGCTCAGCGTCTGGTTGCTTTTGCTGCTGTTGAGGGCATCTTCTTCAGTGG 28919
Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286
|| ||| |||| | |||||||||||||| || | ||| | |||||| |||||
Sbjct 28918 ATCATTCGCTTCTATCTTCTGGCTCAAGAAGCGTGGCTTGATGGCTGGTCTCACTTTCTC 28859
Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319
||| ||||| ||||| ||||| || || |||||
Sbjct 28858 CAATGAGCTCATCTCCCGTGATGAAGGTCTCCA 28826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620714388999200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |