Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq60 259 7e-64
seq3070 107 3e-18
>seq60
Length=14677
Score = 259 bits (286), Expect = 7e-64
Identities = 1143/1780 (64%), Gaps = 41/1780 (2%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| |||||||| |||| |||||||| | ||||| || |||||||| ||||| || |||
Sbjct 7937 GTGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGTCTTGAGA 7996
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | |||| ||| ||||||||| || | ||| | || || ||
Sbjct 7997 CCCAATTTCCAACCGGCGAAATGCATGGAAGTAATCTTGCCCATTGTGGGGTCTTTCATG 8056
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
||||| ||||| ||||| || || | || || || | ||| || ||||||| | |
Sbjct 8057 TGAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGATCAGCGGCCATTTGAACA 8116
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613
|| | ||||| ||| ||||| | ||||| ||| ||||| ||| |||||| |
Sbjct 8117 ATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGTGCCTTGATGTCAGCTGGAATG 8176
Query 68614 CTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670
| | | |||||||| || ||||| || | || || ||||| || | || |
Sbjct 8177 TTGGGAATGTTTTGAATAGAACCACCGTCAGCGATGATGCGGTTCTTCATGTTGTCTGAC 8236
Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730
|| ||| | || | | | | || || || ||||| | ||| ||||| |||
Sbjct 8237 CATAATCCCATGTCGACAAGATCCTTGAGCAGCCATGGGTTAACAACTTGGAATTCTCCA 8296
Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790
| || || | ||||| ||| || ||| || |||||||| | | || || ||
Sbjct 8297 GCCAAGACACGACGAGAGTAGATGTTAGAAGTGTATGGTTCAAAGCACTCGTTGAAACCG 8356
Query 68791 AGAATTTGAGCAGTTGATG-CAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849
|||||||||| || || || | ||||||||||| || || | ||||| || | | |||
Sbjct 8357 AGAATTTGAG-AGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACTGTTGCGGACACC 8415
Query 68850 ATGTGTTATGATTT-TATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACAT 68908
||| | |||| | |||| || | | ||| |||||||| || | ||| |||
Sbjct 8416 GTGTTGTTTGATGGATTTCTTCAAGCTATC-CCAGTCCCAAAGGTCGGTAGGTGTAACTC 8474
Query 68909 TCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAG 68968
||| | ||||||||| || || || || ||| || | || || ||||| |
Sbjct 8475 CCCACATATCGTATTGAAGTTCGCCCTTCGAGACAGGTGAGCCTTCGTAAGTCTCATAGG 8534
Query 68969 GTCCTTCCTGTTCAGCTAGTTCACAACTTGCC-TCT-AATGCACCGTAATAAATTGTTTC 69026
|| || | ||| | || |||| | | | || ||| ||| ||||| |||||
Sbjct 8535 TACCCAACTCCTTAGCAA--TCTCAACGGACGATGTCAAAGCAGCGTGGTAAATAGTTTC 8592
Query 69027 GAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAG-- 69083
||| || | | ||||| | |||| ||||| | || ||||| |||| || ||
Sbjct 8593 GAAGATTTGAATGTTGAGGTGCTTG-GCTTCAGGTGATTCAAATGG-TAATCGAAGAGCC 8650
Query 69084 AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGA 69143
|| ||| ||||| || | || ||||| || | | ||||||||| ||| | ||| |
Sbjct 8651 AAGAAA-GCATCGGCAAGACCTTGAACACCGACAGCGATAGGTCGATGACGGAAATT-GC 8708
Query 69144 ACTTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGA 69202
||||| | | ||||| | || || || || || || || || || || | |||| ||
Sbjct 8709 TCTTTCTGGCCTCTGGGACGGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTTCTGA 8768
Query 69203 CTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAA----CA 69258
| || |||| | || || | || || | ||||| | ||| || | | ||
Sbjct 8769 CAACGACTTGAGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTTCCCTCATTCATGTCCA 8828
Query 69259 AACATATTC--AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCAT 69316
| || || || || | || || | ||||| || || |||| | | |
Sbjct 8829 CAAATGTTGGGAGAGCAATGGAAGCCAAGTTACAGCAAGCGACTTCATCTGGGGCAGAGT 8888
Query 69317 ATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTAC 69376
||| | || ||||| || | ||| | || || || || || | || || |
Sbjct 8889 ATTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATGGTGCCGAGGTTCTTTTGGTTGC 8948
Query 69377 TCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATT 69436
|||| ||||| || || ||||||||||| || || ||| | || || || | |||| |
Sbjct 8949 TCTTCTTGTTGCATGCATCCTTGTAAAGCATGAATGGATTTCCGGTCTCGGTTTGAGCCT 9008
Query 69437 CGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACG-CTTC--TCTT 69493
||| ||| || | ||||| || || || ||||||| || || | || |
Sbjct 9009 CGAGAATGGAGTACCAAAGCTTTTGGGCTTTGAT---GGTCTTGCGACCTCTACCTTCCT 9065
Query 69494 TTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGAC 69553
| ||||| ||| || ||| || || || || | |||||| |||| |||||||
Sbjct 9066 TCTCATAACTCTCATAGAGAGCTTCAAACTCGTCGCCATATACATCAGCCAACCCAGGAC 9125
Query 69554 ATTCATTTGGACACATCAATGACCACACATCATCATCCTT---AACTCGTTTCATAAATA 69610
||||||| || ||||| | || ||| ||| | | ||| ||| || ||||| || |
Sbjct 9126 ATTCATTGGGGCACATTAGTGTCCA---ATCCGCGTTCTTTTCAACACGCTTCATGAAGA 9182
Query 69611 GATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTA 69669
|||| |||||||| | || ||| || ||||| | || | |||||| || ||
Sbjct 9183 GATCCGGAATCCACA-AGGCATAGAAAAGATCACGGGCGCGGACTTCTTCCTTGCCATGG 9241
Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729
|| ||| ||| || || ||||| | || ||| | ||||| || || ||||| | ||
Sbjct 9242 TTCTTTCGAAGGTCCAGGAACTCGAAAACATCTGCGTGCCAAGGCTCAAGATAGACTGCA 9301
Query 69730 ATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACT 69789
| | || || || || ||||| || || || | |||||| |||||||| || | |||
Sbjct 9302 AATGCACCAGGACGCTTGTTTCCACCTTGGTCGACGTATCTAGCAGTGTTGTTGAAAACT 9361
Query 69790 CTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTT 69849
| ||||| || | || || || || ||||| || || || | || || || |
Sbjct 9362 CGTAGCATGGGTACGATGCCGTTGGAGTTACCGTTGGTACCGGCGATGTATGCACCAGTG 9421
Query 69850 GCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAA 69909
|| || || | ||| ||||| || ||||| || |||||||||| | ||||||
Sbjct 9422 GCACGGATTCTGTGAATGTTGAGACCAATACCTCCAGCATTTTTAGAGATCATAGCACAT 9481
Query 69910 CGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAG 69969
|| | || ||||| ||||| || || || || || |||| | || || || ||
Sbjct 9482 GTCTTGAGGGTATCATAAATACCATCAATACTGTCCTCCTTCATATCAATGAGGAAGCAT 9541
Query 69970 CTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAAC 70029
|| | ||| ||| || || || || | |||||| || ||||| |||||
Sbjct 9542 GATGAAAGCTGAGCTTGTGGTGTACCAGCGGAGAAAAGTGTAGGGGAGGCGTGTGTGAAG 9601
Query 70030 CATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAAT 70088
|||| | || | || ||||| || ||||| || || ||||| ||| | |||||
Sbjct 9602 TATTTGTTGGACATAAGGTTGTAGGTCTCAATGGCGCTCTCGATATCGTCACCG-TGAAT 9660
Query 70089 TCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCT 70128
|| | || |||||||| | ||| || || || ||||||
Sbjct 9661 ACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCT 9700
>seq3070
Length=35956
Score = 107 bits (118), Expect = 3e-18
Identities = 304/461 (66%), Gaps = 16/461 (3%)
Strand=Plus/Plus
Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372
|||||| || || ||||| |||||||| | |||||||| || || || |||||| |
Sbjct 28507 CATAACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTTGTCTTGCCTGC 28566
Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAt---ttttttttA-- 39427
| || || || |||||||| || || || || | | || || || | |||
Sbjct 28567 TAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGCAGACTTGTACACCTTCTCGTTACC 28626
Query 39428 AATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCAT-TTC 39486
|| || | || | | ||| || || || || |||||| ||||||| |||
Sbjct 28627 AAGAGCAACTAGGAGA-----CGATCGGCGACGAACTCGATGTATTGCTTCATCAAGTTC 28681
Query 39487 ACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTC 39546
| ||||| || | ||| | || |||||||| || | || |||| |||||| ||
Sbjct 28682 GCG-TTCATGCCAAGAAGTGCACAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATCTC 28740
Query 39547 TACGGCCTCTGTTATTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGT 39604
|| |||||||| || | || || || ||| | || || | ||| || ||
Sbjct 28741 GACAGCCTCTGTGATGAC--ATCTTGGACAGCCTGCTTGCTTGGACGGTGCTTCAAGTGG 28798
Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664
|| | | ||| |||||||| ||| || || ||||| | || | || ||
Sbjct 28799 GAGAAGAGGAGGCACGCGAAGTCGGTATGGAGACCTTCATCACGGGAGATGAGCTCATTG 28858
Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724
|| || ||||| |||| ||| | |||||||| |||||||| || || | ||| || |||
Sbjct 28859 GAGAAAGTGAGACCAGCCATCAAGCCACGCTTCTTGAGCCAGAAGATAGAAGCGAATGAT 28918
Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765
||| ||||||||||| || || || ||||| ||||| ||
Sbjct 28919 CCACTGAAGAAGATGCCCTCAACAGCAGCAAAAGCAACCAG 28959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686877803240400
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